Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.68■□□□□ 0.42
C3orf56Q8N813 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.68■□□□□ 0.42
C3orf56Q8N813 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.68■□□□□ 0.42
C3orf56Q8N813 TMEM191A-211ENST00000637163 1067 ntBASIC17.68■□□□□ 0.42
C3orf56Q8N813 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C3orf56Q8N813 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C3orf56Q8N813 SHF-208ENST00000560734 1731 ntTSL 3 BASIC17.67■□□□□ 0.42
C3orf56Q8N813 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
C3orf56Q8N813 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
C3orf56Q8N813 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.67■□□□□ 0.42
C3orf56Q8N813 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
C3orf56Q8N813 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC17.67■□□□□ 0.42
C3orf56Q8N813 TERF1P2-201ENST00000583350 1212 ntBASIC17.67■□□□□ 0.42
C3orf56Q8N813 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C3orf56Q8N813 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C3orf56Q8N813 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
C3orf56Q8N813 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
C3orf56Q8N813 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C3orf56Q8N813 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C3orf56Q8N813 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
C3orf56Q8N813 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
C3orf56Q8N813 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
C3orf56Q8N813 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
C3orf56Q8N813 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
C3orf56Q8N813 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
C3orf56Q8N813 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
C3orf56Q8N813 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
C3orf56Q8N813 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.66■□□□□ 0.42
C3orf56Q8N813 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC17.66■□□□□ 0.42
C3orf56Q8N813 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
C3orf56Q8N813 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC17.66■□□□□ 0.42
C3orf56Q8N813 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC17.66■□□□□ 0.42
C3orf56Q8N813 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
C3orf56Q8N813 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
C3orf56Q8N813 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
C3orf56Q8N813 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
C3orf56Q8N813 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
C3orf56Q8N813 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
C3orf56Q8N813 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.65■□□□□ 0.42
C3orf56Q8N813 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
C3orf56Q8N813 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.65■□□□□ 0.42
C3orf56Q8N813 AC137761.2-201ENST00000561729 223 ntBASIC17.65■□□□□ 0.42
C3orf56Q8N813 AC145350.3-201ENST00000569033 163 ntBASIC17.65■□□□□ 0.42
C3orf56Q8N813 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
C3orf56Q8N813 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
C3orf56Q8N813 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
C3orf56Q8N813 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
C3orf56Q8N813 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
C3orf56Q8N813 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
C3orf56Q8N813 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC17.64■□□□□ 0.41
C3orf56Q8N813 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.64■□□□□ 0.41
C3orf56Q8N813 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C3orf56Q8N813 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC17.64■□□□□ 0.41
C3orf56Q8N813 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.64■□□□□ 0.41
C3orf56Q8N813 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
C3orf56Q8N813 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
C3orf56Q8N813 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.64■□□□□ 0.41
C3orf56Q8N813 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C3orf56Q8N813 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
C3orf56Q8N813 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C3orf56Q8N813 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
C3orf56Q8N813 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
C3orf56Q8N813 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
C3orf56Q8N813 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
C3orf56Q8N813 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
C3orf56Q8N813 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.63■□□□□ 0.41
C3orf56Q8N813 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.63■□□□□ 0.41
C3orf56Q8N813 AL355802.2-201ENST00000402069 882 ntBASIC17.63■□□□□ 0.41
C3orf56Q8N813 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
C3orf56Q8N813 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
C3orf56Q8N813 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
C3orf56Q8N813 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
C3orf56Q8N813 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.62■□□□□ 0.41
C3orf56Q8N813 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
C3orf56Q8N813 SHF-206ENST00000560471 2499 ntTSL 5 BASIC17.62■□□□□ 0.41
C3orf56Q8N813 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
C3orf56Q8N813 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
C3orf56Q8N813 AC026185.1-201ENST00000445748 174 ntBASIC17.62■□□□□ 0.41
C3orf56Q8N813 AC006970.2-201ENST00000450065 779 ntBASIC17.62■□□□□ 0.41
C3orf56Q8N813 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
C3orf56Q8N813 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.62■□□□□ 0.41
C3orf56Q8N813 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
C3orf56Q8N813 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
C3orf56Q8N813 AC096887.2-201ENST00000623443 1957 ntBASIC17.62■□□□□ 0.41
C3orf56Q8N813 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.62■□□□□ 0.41
C3orf56Q8N813 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC17.61■□□□□ 0.41
C3orf56Q8N813 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
C3orf56Q8N813 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC17.61■□□□□ 0.41
C3orf56Q8N813 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.61■□□□□ 0.41
C3orf56Q8N813 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.61■□□□□ 0.41
C3orf56Q8N813 AC073111.5-205ENST00000641717 521 ntBASIC17.61■□□□□ 0.41
C3orf56Q8N813 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.61■□□□□ 0.41
C3orf56Q8N813 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.61■□□□□ 0.41
C3orf56Q8N813 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC17.61■□□□□ 0.41
C3orf56Q8N813 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C3orf56Q8N813 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC17.61■□□□□ 0.41
C3orf56Q8N813 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
C3orf56Q8N813 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
C3orf56Q8N813 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC17.6■□□□□ 0.41
C3orf56Q8N813 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms