Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
COMMD1Q8N668 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.6■□□□□ 0.57
COMMD1Q8N668 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD1Q8N668 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD1Q8N668 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.6■□□□□ 0.57
COMMD1Q8N668 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.6■□□□□ 0.57
COMMD1Q8N668 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD1Q8N668 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD1Q8N668 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD1Q8N668 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
COMMD1Q8N668 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD1Q8N668 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD1Q8N668 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD1Q8N668 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
COMMD1Q8N668 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD1Q8N668 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.59■□□□□ 0.57
COMMD1Q8N668 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
COMMD1Q8N668 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD1Q8N668 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD1Q8N668 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD1Q8N668 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD1Q8N668 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD1Q8N668 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COMMD1Q8N668 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COMMD1Q8N668 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COMMD1Q8N668 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
COMMD1Q8N668 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
COMMD1Q8N668 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COMMD1Q8N668 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
COMMD1Q8N668 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
COMMD1Q8N668 AC103724.3-201ENST00000564481 992 ntBASIC18.58■□□□□ 0.56
COMMD1Q8N668 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
COMMD1Q8N668 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COMMD1Q8N668 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COMMD1Q8N668 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.58■□□□□ 0.56
COMMD1Q8N668 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.58■□□□□ 0.56
COMMD1Q8N668 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
COMMD1Q8N668 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD1Q8N668 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
COMMD1Q8N668 AL451085.2-201ENST00000605085 799 ntBASIC18.57■□□□□ 0.56
COMMD1Q8N668 AL035685.1-201ENST00000636663 812 ntBASIC18.57■□□□□ 0.56
COMMD1Q8N668 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD1Q8N668 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD1Q8N668 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD1Q8N668 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
COMMD1Q8N668 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD1Q8N668 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD1Q8N668 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD1Q8N668 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD1Q8N668 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.56■□□□□ 0.56
COMMD1Q8N668 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD1Q8N668 KRT18P24-201ENST00000344739 1156 ntBASIC18.56■□□□□ 0.56
COMMD1Q8N668 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
COMMD1Q8N668 ECEL1P1-201ENST00000373592 1742 ntBASIC18.56■□□□□ 0.56
COMMD1Q8N668 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD1Q8N668 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD1Q8N668 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD1Q8N668 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD1Q8N668 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.56■□□□□ 0.56
COMMD1Q8N668 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.56■□□□□ 0.56
COMMD1Q8N668 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.56■□□□□ 0.56
COMMD1Q8N668 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.56■□□□□ 0.56
COMMD1Q8N668 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COMMD1Q8N668 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
COMMD1Q8N668 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COMMD1Q8N668 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COMMD1Q8N668 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
COMMD1Q8N668 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.55■□□□□ 0.56
COMMD1Q8N668 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COMMD1Q8N668 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.55■□□□□ 0.56
COMMD1Q8N668 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COMMD1Q8N668 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COMMD1Q8N668 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
COMMD1Q8N668 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.55■□□□□ 0.56
COMMD1Q8N668 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
COMMD1Q8N668 FOXO3B-201ENST00000395675 1928 ntBASIC18.55■□□□□ 0.56
COMMD1Q8N668 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.54■□□□□ 0.56
COMMD1Q8N668 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
COMMD1Q8N668 SLC25A24-204ENST00000569674 2357 ntBASIC18.54■□□□□ 0.56
COMMD1Q8N668 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.54■□□□□ 0.56
COMMD1Q8N668 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.54■□□□□ 0.56
COMMD1Q8N668 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
COMMD1Q8N668 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COMMD1Q8N668 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COMMD1Q8N668 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
COMMD1Q8N668 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COMMD1Q8N668 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
COMMD1Q8N668 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COMMD1Q8N668 DUSP8P3-201ENST00000399571 1760 ntBASIC18.53■□□□□ 0.56
COMMD1Q8N668 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
COMMD1Q8N668 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COMMD1Q8N668 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
COMMD1Q8N668 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
COMMD1Q8N668 AC009299.2-201ENST00000482477 511 ntBASIC18.53■□□□□ 0.56
COMMD1Q8N668 THA1P-201ENST00000590384 1145 ntBASIC18.53■□□□□ 0.56
COMMD1Q8N668 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.53■□□□□ 0.56
COMMD1Q8N668 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.53■□□□□ 0.56
COMMD1Q8N668 GUSBP5-202ENST00000510805 1989 ntBASIC18.53■□□□□ 0.56
COMMD1Q8N668 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
COMMD1Q8N668 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms