Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.36■□□□□ 0.53
LINC00311Q8N616 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC00311Q8N616 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.36■□□□□ 0.53
LINC00311Q8N616 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
LINC00311Q8N616 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC00311Q8N616 DUSP8P3-201ENST00000399571 1760 ntBASIC18.36■□□□□ 0.53
LINC00311Q8N616 TSPY9P-201ENST00000440215 945 ntBASIC18.36■□□□□ 0.53
LINC00311Q8N616 TSPY11P-201ENST00000442607 1045 ntBASIC18.36■□□□□ 0.53
LINC00311Q8N616 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.36■□□□□ 0.53
LINC00311Q8N616 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
LINC00311Q8N616 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
LINC00311Q8N616 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.35■□□□□ 0.53
LINC00311Q8N616 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
LINC00311Q8N616 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC00311Q8N616 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.35■□□□□ 0.53
LINC00311Q8N616 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
LINC00311Q8N616 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.35■□□□□ 0.53
LINC00311Q8N616 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.35■□□□□ 0.53
LINC00311Q8N616 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.35■□□□□ 0.53
LINC00311Q8N616 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC00311Q8N616 UNC93B8-201ENST00000511903 705 ntBASIC18.35■□□□□ 0.53
LINC00311Q8N616 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.35■□□□□ 0.53
LINC00311Q8N616 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.35■□□□□ 0.53
LINC00311Q8N616 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC00311Q8N616 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
LINC00311Q8N616 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.35■□□□□ 0.53
LINC00311Q8N616 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC00311Q8N616 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC00311Q8N616 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.35■□□□□ 0.53
LINC00311Q8N616 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
LINC00311Q8N616 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC00311Q8N616 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LINC00311Q8N616 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC00311Q8N616 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC00311Q8N616 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LINC00311Q8N616 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC00311Q8N616 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC00311Q8N616 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.34■□□□□ 0.53
LINC00311Q8N616 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC00311Q8N616 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC00311Q8N616 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.34■□□□□ 0.53
LINC00311Q8N616 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LINC00311Q8N616 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LINC00311Q8N616 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LINC00311Q8N616 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.34■□□□□ 0.53
LINC00311Q8N616 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
LINC00311Q8N616 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
LINC00311Q8N616 AC079630.1-202ENST00000618127 1840 ntBASIC18.33■□□□□ 0.53
LINC00311Q8N616 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LINC00311Q8N616 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
LINC00311Q8N616 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LINC00311Q8N616 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.33■□□□□ 0.52
LINC00311Q8N616 MIR6724-1-201ENST00000616420 92 ntBASIC18.33■□□□□ 0.52
LINC00311Q8N616 MIR6724-2-201ENST00000616483 92 ntBASIC18.33■□□□□ 0.52
LINC00311Q8N616 MIR6724-4-201ENST00000617390 92 ntBASIC18.33■□□□□ 0.52
LINC00311Q8N616 MIR6724-3-201ENST00000622482 92 ntBASIC18.33■□□□□ 0.52
LINC00311Q8N616 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LINC00311Q8N616 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.33■□□□□ 0.52
LINC00311Q8N616 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LINC00311Q8N616 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LINC00311Q8N616 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LINC00311Q8N616 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
LINC00311Q8N616 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
LINC00311Q8N616 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LINC00311Q8N616 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00311Q8N616 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00311Q8N616 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00311Q8N616 GUSBP5-201ENST00000418136 578 ntBASIC18.32■□□□□ 0.52
LINC00311Q8N616 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.32■□□□□ 0.52
LINC00311Q8N616 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00311Q8N616 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00311Q8N616 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00311Q8N616 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
LINC00311Q8N616 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LINC00311Q8N616 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.31■□□□□ 0.52
LINC00311Q8N616 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
LINC00311Q8N616 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
LINC00311Q8N616 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.31■□□□□ 0.52
LINC00311Q8N616 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.31■□□□□ 0.52
LINC00311Q8N616 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.31■□□□□ 0.52
LINC00311Q8N616 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.31■□□□□ 0.52
LINC00311Q8N616 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.31■□□□□ 0.52
LINC00311Q8N616 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LINC00311Q8N616 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
LINC00311Q8N616 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.3■□□□□ 0.52
LINC00311Q8N616 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
LINC00311Q8N616 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.3■□□□□ 0.52
LINC00311Q8N616 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LINC00311Q8N616 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
LINC00311Q8N616 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LINC00311Q8N616 AC144652.1-201ENST00000609974 1624 ntBASIC18.3■□□□□ 0.52
LINC00311Q8N616 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LINC00311Q8N616 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LINC00311Q8N616 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC00311Q8N616 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC00311Q8N616 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC00311Q8N616 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
LINC00311Q8N616 KRT16P3-201ENST00000439127 1283 ntBASIC18.29■□□□□ 0.52
LINC00311Q8N616 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.29■□□□□ 0.52
LINC00311Q8N616 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 910.9 ms