Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC35.64■■■■□ 3.3
VPS8Q8N3P4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC35.64■■■■□ 3.3
VPS8Q8N3P4 SF1-220ENST00000626028 704 ntTSL 2 BASIC35.64■■■■□ 3.3
VPS8Q8N3P4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC35.63■■■■□ 3.29
VPS8Q8N3P4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC35.63■■■■□ 3.29
VPS8Q8N3P4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC35.63■■■■□ 3.29
VPS8Q8N3P4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC35.63■■■■□ 3.29
VPS8Q8N3P4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC35.63■■■■□ 3.29
VPS8Q8N3P4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
VPS8Q8N3P4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC35.62■■■■□ 3.29
VPS8Q8N3P4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC35.62■■■■□ 3.29
VPS8Q8N3P4 PTCHD3P2-201ENST00000424937 1205 ntBASIC35.62■■■■□ 3.29
VPS8Q8N3P4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC35.62■■■■□ 3.29
VPS8Q8N3P4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC35.61■■■■□ 3.29
VPS8Q8N3P4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
VPS8Q8N3P4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC35.61■■■■□ 3.29
VPS8Q8N3P4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC35.61■■■■□ 3.29
VPS8Q8N3P4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC35.61■■■■□ 3.29
VPS8Q8N3P4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC35.61■■■■□ 3.29
VPS8Q8N3P4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC35.6■■■■□ 3.29
VPS8Q8N3P4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC35.6■■■■□ 3.29
VPS8Q8N3P4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
VPS8Q8N3P4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
VPS8Q8N3P4 SERBP1P1-201ENST00000396021 1160 ntBASIC35.6■■■■□ 3.29
VPS8Q8N3P4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC35.6■■■■□ 3.29
VPS8Q8N3P4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC35.6■■■■□ 3.29
VPS8Q8N3P4 AC106739.1-201ENST00000617035 715 ntBASIC35.6■■■■□ 3.29
VPS8Q8N3P4 AC241377.3-202ENST00000626088 1088 ntBASIC35.6■■■■□ 3.29
VPS8Q8N3P4 AC241585.3-202ENST00000628937 1088 ntBASIC35.6■■■■□ 3.29
VPS8Q8N3P4 AC245100.8-202ENST00000629247 1058 ntBASIC35.6■■■■□ 3.29
VPS8Q8N3P4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC35.6■■■■□ 3.29
VPS8Q8N3P4 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC35.6■■■■□ 3.29
VPS8Q8N3P4 UNC93B3-201ENST00000308076 687 ntBASIC35.59■■■■□ 3.29
VPS8Q8N3P4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
VPS8Q8N3P4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC35.59■■■■□ 3.29
VPS8Q8N3P4 AL031432.3-201ENST00000607698 485 ntBASIC35.59■■■■□ 3.29
VPS8Q8N3P4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC35.59■■■■□ 3.29
VPS8Q8N3P4 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
VPS8Q8N3P4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC35.59■■■■□ 3.29
VPS8Q8N3P4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC35.58■■■■□ 3.29
VPS8Q8N3P4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
VPS8Q8N3P4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC35.58■■■■□ 3.29
VPS8Q8N3P4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC35.58■■■■□ 3.29
VPS8Q8N3P4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
VPS8Q8N3P4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.29
VPS8Q8N3P4 AL136162.1-201ENST00000607711 1078 ntBASIC35.57■■■■□ 3.29
VPS8Q8N3P4 AC009086.3-201ENST00000623486 1008 ntBASIC35.57■■■■□ 3.29
VPS8Q8N3P4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC35.57■■■■□ 3.29
VPS8Q8N3P4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC35.57■■■■□ 3.28
VPS8Q8N3P4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.28
VPS8Q8N3P4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC35.57■■■■□ 3.28
VPS8Q8N3P4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC35.57■■■■□ 3.28
VPS8Q8N3P4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC35.57■■■■□ 3.28
VPS8Q8N3P4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC35.57■■■■□ 3.28
VPS8Q8N3P4 AC024257.2-201ENST00000549699 147 ntBASIC35.57■■■■□ 3.28
VPS8Q8N3P4 RALB-208ENST00000631312 311 ntTSL 5 BASIC35.57■■■■□ 3.28
VPS8Q8N3P4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC35.56■■■■□ 3.28
VPS8Q8N3P4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC35.56■■■■□ 3.28
VPS8Q8N3P4 AC135279.3-201ENST00000610945 1311 ntBASIC35.56■■■■□ 3.28
VPS8Q8N3P4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC35.56■■■■□ 3.28
VPS8Q8N3P4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
VPS8Q8N3P4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC35.56■■■■□ 3.28
VPS8Q8N3P4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
VPS8Q8N3P4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
VPS8Q8N3P4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC35.55■■■■□ 3.28
VPS8Q8N3P4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC35.55■■■■□ 3.28
VPS8Q8N3P4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
VPS8Q8N3P4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
VPS8Q8N3P4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC35.55■■■■□ 3.28
VPS8Q8N3P4 AC092171.4-201ENST00000609130 632 ntBASIC35.55■■■■□ 3.28
VPS8Q8N3P4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC35.55■■■■□ 3.28
VPS8Q8N3P4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC35.55■■■■□ 3.28
VPS8Q8N3P4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC35.55■■■■□ 3.28
VPS8Q8N3P4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC35.55■■■■□ 3.28
VPS8Q8N3P4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
VPS8Q8N3P4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
VPS8Q8N3P4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
VPS8Q8N3P4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC35.54■■■■□ 3.28
VPS8Q8N3P4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
VPS8Q8N3P4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
VPS8Q8N3P4 DUX4L19-201ENST00000557448 1267 ntBASIC35.54■■■■□ 3.28
VPS8Q8N3P4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC35.54■■■■□ 3.28
VPS8Q8N3P4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
VPS8Q8N3P4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
VPS8Q8N3P4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC35.53■■■■□ 3.28
VPS8Q8N3P4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
VPS8Q8N3P4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
VPS8Q8N3P4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC35.53■■■■□ 3.28
VPS8Q8N3P4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC35.53■■■■□ 3.28
VPS8Q8N3P4 AC133561.4-201ENST00000566112 224 ntBASIC35.53■■■■□ 3.28
VPS8Q8N3P4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC35.53■■■■□ 3.28
VPS8Q8N3P4 AC011298.3-201ENST00000615796 283 ntBASIC35.53■■■■□ 3.28
VPS8Q8N3P4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC35.53■■■■□ 3.28
VPS8Q8N3P4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
VPS8Q8N3P4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC35.53■■■■□ 3.28
VPS8Q8N3P4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC35.53■■■■□ 3.28
VPS8Q8N3P4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
VPS8Q8N3P4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC35.53■■■■□ 3.28
VPS8Q8N3P4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
VPS8Q8N3P4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC35.52■■■■□ 3.28
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms