Protein–RNA interactions for Protein: Q8N309

LRRC43, Leucine-rich repeat-containing protein 43, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC43Q8N309 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
LRRC43Q8N309 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
LRRC43Q8N309 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
LRRC43Q8N309 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
LRRC43Q8N309 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
LRRC43Q8N309 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
LRRC43Q8N309 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
LRRC43Q8N309 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LRRC43Q8N309 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
LRRC43Q8N309 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
LRRC43Q8N309 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC24.4■■□□□ 1.5
LRRC43Q8N309 GRAMD4P2-201ENST00000423297 1097 ntBASIC24.4■■□□□ 1.5
LRRC43Q8N309 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC24.4■■□□□ 1.5
LRRC43Q8N309 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC24.4■■□□□ 1.5
LRRC43Q8N309 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC24.4■■□□□ 1.5
LRRC43Q8N309 pRNA.6-201ENST00000610482 90 ntBASIC24.4■■□□□ 1.5
LRRC43Q8N309 pRNA.5-201ENST00000612139 90 ntBASIC24.4■■□□□ 1.5
LRRC43Q8N309 pRNA.11-201ENST00000618423 90 ntBASIC24.4■■□□□ 1.5
LRRC43Q8N309 pRNA.13-201ENST00000619112 90 ntBASIC24.4■■□□□ 1.5
LRRC43Q8N309 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC24.4■■□□□ 1.5
LRRC43Q8N309 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
LRRC43Q8N309 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
LRRC43Q8N309 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
LRRC43Q8N309 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
LRRC43Q8N309 SNX3-202ENST00000349379 890 ntTSL 2 BASIC24.39■■□□□ 1.49
LRRC43Q8N309 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC24.39■■□□□ 1.49
LRRC43Q8N309 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
LRRC43Q8N309 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
LRRC43Q8N309 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC24.38■■□□□ 1.49
LRRC43Q8N309 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
LRRC43Q8N309 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC24.38■■□□□ 1.49
LRRC43Q8N309 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
LRRC43Q8N309 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
LRRC43Q8N309 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
LRRC43Q8N309 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
LRRC43Q8N309 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
LRRC43Q8N309 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
LRRC43Q8N309 JTB-203ENST00000368589 1216 ntTSL 2 BASIC24.37■■□□□ 1.49
LRRC43Q8N309 AL162430.1-201ENST00000480705 870 ntBASIC24.37■■□□□ 1.49
LRRC43Q8N309 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC24.37■■□□□ 1.49
LRRC43Q8N309 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
LRRC43Q8N309 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.37■■□□□ 1.49
LRRC43Q8N309 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC24.36■■□□□ 1.49
LRRC43Q8N309 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
LRRC43Q8N309 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
LRRC43Q8N309 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
LRRC43Q8N309 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC24.36■■□□□ 1.49
LRRC43Q8N309 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LRRC43Q8N309 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
LRRC43Q8N309 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.35■■□□□ 1.49
LRRC43Q8N309 AC141586.4-201ENST00000624558 1573 ntBASIC24.35■■□□□ 1.49
LRRC43Q8N309 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
LRRC43Q8N309 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LRRC43Q8N309 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC24.35■■□□□ 1.49
LRRC43Q8N309 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
LRRC43Q8N309 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
LRRC43Q8N309 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
LRRC43Q8N309 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
LRRC43Q8N309 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.35■■□□□ 1.49
LRRC43Q8N309 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24.35■■□□□ 1.49
LRRC43Q8N309 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24.35■■□□□ 1.49
LRRC43Q8N309 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LRRC43Q8N309 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
LRRC43Q8N309 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
LRRC43Q8N309 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
LRRC43Q8N309 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC24.34■■□□□ 1.49
LRRC43Q8N309 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC24.34■■□□□ 1.49
LRRC43Q8N309 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
LRRC43Q8N309 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
LRRC43Q8N309 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.33■■□□□ 1.49
LRRC43Q8N309 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC24.33■■□□□ 1.49
LRRC43Q8N309 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
LRRC43Q8N309 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
LRRC43Q8N309 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.33■■□□□ 1.49
LRRC43Q8N309 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC24.33■■□□□ 1.49
LRRC43Q8N309 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
LRRC43Q8N309 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC24.33■■□□□ 1.48
LRRC43Q8N309 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC24.32■■□□□ 1.48
LRRC43Q8N309 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
LRRC43Q8N309 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.32■■□□□ 1.48
LRRC43Q8N309 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
LRRC43Q8N309 AK1-201ENST00000223836 736 ntTSL 3 BASIC24.32■■□□□ 1.48
LRRC43Q8N309 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
LRRC43Q8N309 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC24.32■■□□□ 1.48
LRRC43Q8N309 AC126544.1-201ENST00000580842 1059 ntBASIC24.32■■□□□ 1.48
LRRC43Q8N309 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
LRRC43Q8N309 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
LRRC43Q8N309 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
LRRC43Q8N309 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
LRRC43Q8N309 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
LRRC43Q8N309 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.31■■□□□ 1.48
LRRC43Q8N309 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
LRRC43Q8N309 GLI3-203ENST00000437480 451 ntTSL 2 BASIC24.31■■□□□ 1.48
LRRC43Q8N309 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC24.31■■□□□ 1.48
LRRC43Q8N309 SP2-202ENST00000613139 908 ntTSL 5 BASIC24.31■■□□□ 1.48
LRRC43Q8N309 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
LRRC43Q8N309 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
LRRC43Q8N309 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC24.31■■□□□ 1.48
LRRC43Q8N309 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
LRRC43Q8N309 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms