Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.86■■□□□ 1.41
SCN4BQ8IWT1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SCN4BQ8IWT1 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SCN4BQ8IWT1 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
SCN4BQ8IWT1 AC141586.4-201ENST00000624558 1573 ntBASIC23.86■■□□□ 1.41
SCN4BQ8IWT1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
SCN4BQ8IWT1 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SCN4BQ8IWT1 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SCN4BQ8IWT1 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.85■■□□□ 1.41
SCN4BQ8IWT1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.85■■□□□ 1.41
SCN4BQ8IWT1 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.85■■□□□ 1.41
SCN4BQ8IWT1 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.85■■□□□ 1.41
SCN4BQ8IWT1 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.85■■□□□ 1.41
SCN4BQ8IWT1 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SCN4BQ8IWT1 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SCN4BQ8IWT1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SCN4BQ8IWT1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SCN4BQ8IWT1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.84■■□□□ 1.41
SCN4BQ8IWT1 AC133561.4-201ENST00000566112 224 ntBASIC23.84■■□□□ 1.41
SCN4BQ8IWT1 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SCN4BQ8IWT1 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
SCN4BQ8IWT1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SCN4BQ8IWT1 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.84■■□□□ 1.41
SCN4BQ8IWT1 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SCN4BQ8IWT1 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
SCN4BQ8IWT1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SCN4BQ8IWT1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
SCN4BQ8IWT1 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
SCN4BQ8IWT1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SCN4BQ8IWT1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.83■■□□□ 1.41
SCN4BQ8IWT1 SERBP1P1-201ENST00000396021 1160 ntBASIC23.83■■□□□ 1.41
SCN4BQ8IWT1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
SCN4BQ8IWT1 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.83■■□□□ 1.41
SCN4BQ8IWT1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.83■■□□□ 1.41
SCN4BQ8IWT1 AC241377.3-202ENST00000626088 1088 ntBASIC23.83■■□□□ 1.41
SCN4BQ8IWT1 AC241585.3-202ENST00000628937 1088 ntBASIC23.83■■□□□ 1.41
SCN4BQ8IWT1 AC245100.8-202ENST00000629247 1058 ntBASIC23.83■■□□□ 1.41
SCN4BQ8IWT1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SCN4BQ8IWT1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
SCN4BQ8IWT1 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SCN4BQ8IWT1 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SCN4BQ8IWT1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
SCN4BQ8IWT1 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
SCN4BQ8IWT1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SCN4BQ8IWT1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.82■■□□□ 1.4
SCN4BQ8IWT1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCN4BQ8IWT1 AC006455.2-201ENST00000429931 906 ntBASIC23.82■■□□□ 1.4
SCN4BQ8IWT1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCN4BQ8IWT1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCN4BQ8IWT1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCN4BQ8IWT1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.81■■□□□ 1.4
SCN4BQ8IWT1 AC009086.3-201ENST00000623486 1008 ntBASIC23.81■■□□□ 1.4
SCN4BQ8IWT1 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.81■■□□□ 1.4
SCN4BQ8IWT1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SCN4BQ8IWT1 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.81■■□□□ 1.4
SCN4BQ8IWT1 AC004812.2-201ENST00000611079 2094 ntBASIC23.8■■□□□ 1.4
SCN4BQ8IWT1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SCN4BQ8IWT1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.8■■□□□ 1.4
SCN4BQ8IWT1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCN4BQ8IWT1 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCN4BQ8IWT1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.8■■□□□ 1.4
SCN4BQ8IWT1 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SCN4BQ8IWT1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCN4BQ8IWT1 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
SCN4BQ8IWT1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCN4BQ8IWT1 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCN4BQ8IWT1 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.79■■□□□ 1.4
SCN4BQ8IWT1 AC142381.2-201ENST00000566120 298 ntBASIC23.79■■□□□ 1.4
SCN4BQ8IWT1 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SCN4BQ8IWT1 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCN4BQ8IWT1 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SCN4BQ8IWT1 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SCN4BQ8IWT1 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SCN4BQ8IWT1 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCN4BQ8IWT1 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.78■■□□□ 1.4
SCN4BQ8IWT1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SCN4BQ8IWT1 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCN4BQ8IWT1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SCN4BQ8IWT1 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCN4BQ8IWT1 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SCN4BQ8IWT1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SCN4BQ8IWT1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
SCN4BQ8IWT1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.77■■□□□ 1.4
SCN4BQ8IWT1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.77■■□□□ 1.4
SCN4BQ8IWT1 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SCN4BQ8IWT1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
SCN4BQ8IWT1 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SCN4BQ8IWT1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.76■■□□□ 1.39
SCN4BQ8IWT1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.76■■□□□ 1.39
SCN4BQ8IWT1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.76■■□□□ 1.39
SCN4BQ8IWT1 MIR4767-201ENST00000582827 78 ntBASIC23.76■■□□□ 1.39
SCN4BQ8IWT1 AL031432.3-201ENST00000607698 485 ntBASIC23.76■■□□□ 1.39
SCN4BQ8IWT1 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.76■■□□□ 1.39
SCN4BQ8IWT1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
SCN4BQ8IWT1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.76■■□□□ 1.39
SCN4BQ8IWT1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCN4BQ8IWT1 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
SCN4BQ8IWT1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCN4BQ8IWT1 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCN4BQ8IWT1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms