Protein–RNA interactions for Protein: Q86VN1

VPS36, Vacuolar protein-sorting-associated protein 36, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36Q86VN1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.26■■□□□ 1.47
VPS36Q86VN1 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
VPS36Q86VN1 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC24.26■■□□□ 1.47
VPS36Q86VN1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
VPS36Q86VN1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
VPS36Q86VN1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
VPS36Q86VN1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC24.25■■□□□ 1.47
VPS36Q86VN1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
VPS36Q86VN1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
VPS36Q86VN1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
VPS36Q86VN1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
VPS36Q86VN1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
VPS36Q86VN1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.25■■□□□ 1.47
VPS36Q86VN1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
VPS36Q86VN1 MIR4281-201ENST00000580852 62 ntBASIC24.25■■□□□ 1.47
VPS36Q86VN1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
VPS36Q86VN1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC24.24■■□□□ 1.47
VPS36Q86VN1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
VPS36Q86VN1 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
VPS36Q86VN1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC24.24■■□□□ 1.47
VPS36Q86VN1 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC24.24■■□□□ 1.47
VPS36Q86VN1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC24.24■■□□□ 1.47
VPS36Q86VN1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
VPS36Q86VN1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
VPS36Q86VN1 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
VPS36Q86VN1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC24.23■■□□□ 1.47
VPS36Q86VN1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
VPS36Q86VN1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
VPS36Q86VN1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
VPS36Q86VN1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
VPS36Q86VN1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
VPS36Q86VN1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
VPS36Q86VN1 H19-210ENST00000439725 1929 ntTSL 2 BASIC24.23■■□□□ 1.47
VPS36Q86VN1 AC079834.2-201ENST00000609776 1949 ntBASIC24.23■■□□□ 1.47
VPS36Q86VN1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
VPS36Q86VN1 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
VPS36Q86VN1 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
VPS36Q86VN1 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
VPS36Q86VN1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
VPS36Q86VN1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.22■■□□□ 1.47
VPS36Q86VN1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.22■■□□□ 1.47
VPS36Q86VN1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC24.22■■□□□ 1.47
VPS36Q86VN1 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC24.22■■□□□ 1.47
VPS36Q86VN1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
VPS36Q86VN1 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
VPS36Q86VN1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
VPS36Q86VN1 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
VPS36Q86VN1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
VPS36Q86VN1 AF131216.4-201ENST00000638924 1588 ntBASIC24.21■■□□□ 1.47
VPS36Q86VN1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC24.21■■□□□ 1.47
VPS36Q86VN1 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
VPS36Q86VN1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC24.21■■□□□ 1.47
VPS36Q86VN1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.21■■□□□ 1.47
VPS36Q86VN1 AC010980.1-201ENST00000587192 1142 ntBASIC24.21■■□□□ 1.47
VPS36Q86VN1 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC24.21■■□□□ 1.47
VPS36Q86VN1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
VPS36Q86VN1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC24.21■■□□□ 1.47
VPS36Q86VN1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.2■■□□□ 1.47
VPS36Q86VN1 GALC-202ENST00000393568 2054 ntTSL 2 BASIC24.2■■□□□ 1.47
VPS36Q86VN1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
VPS36Q86VN1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
VPS36Q86VN1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
VPS36Q86VN1 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
VPS36Q86VN1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
VPS36Q86VN1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
VPS36Q86VN1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.2■■□□□ 1.46
VPS36Q86VN1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC24.2■■□□□ 1.46
VPS36Q86VN1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.2■■□□□ 1.46
VPS36Q86VN1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC24.2■■□□□ 1.46
VPS36Q86VN1 PVT1_1.1-201ENST00000615125 194 ntBASIC24.2■■□□□ 1.46
VPS36Q86VN1 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
VPS36Q86VN1 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.46
VPS36Q86VN1 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC24.2■■□□□ 1.46
VPS36Q86VN1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC24.19■■□□□ 1.46
VPS36Q86VN1 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
VPS36Q86VN1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
VPS36Q86VN1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
VPS36Q86VN1 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
VPS36Q86VN1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
VPS36Q86VN1 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
VPS36Q86VN1 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
VPS36Q86VN1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
VPS36Q86VN1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC24.18■■□□□ 1.46
VPS36Q86VN1 AC004448.1-201ENST00000458332 883 ntBASIC24.18■■□□□ 1.46
VPS36Q86VN1 RARRES2P1-201ENST00000474487 481 ntBASIC24.18■■□□□ 1.46
VPS36Q86VN1 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC24.18■■□□□ 1.46
VPS36Q86VN1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
VPS36Q86VN1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC24.18■■□□□ 1.46
VPS36Q86VN1 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC24.18■■□□□ 1.46
VPS36Q86VN1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
VPS36Q86VN1 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
VPS36Q86VN1 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
VPS36Q86VN1 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
VPS36Q86VN1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
VPS36Q86VN1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
VPS36Q86VN1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.17■■□□□ 1.46
VPS36Q86VN1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.17■■□□□ 1.46
VPS36Q86VN1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC24.17■■□□□ 1.46
VPS36Q86VN1 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
VPS36Q86VN1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC24.17■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms