Protein–RNA interactions for Protein: Q86UF4

CCDC190, Coiled-coil domain-containing protein 190, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC190Q86UF4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC190Q86UF4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC190Q86UF4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC190Q86UF4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC190Q86UF4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CCDC190Q86UF4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC190Q86UF4 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC190Q86UF4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CCDC190Q86UF4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC190Q86UF4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.71■□□□□ 0.75
CCDC190Q86UF4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC190Q86UF4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC190Q86UF4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CCDC190Q86UF4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC190Q86UF4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC190Q86UF4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC190Q86UF4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CCDC190Q86UF4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC190Q86UF4 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC190Q86UF4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC190Q86UF4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC190Q86UF4 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC190Q86UF4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC190Q86UF4 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC190Q86UF4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC190Q86UF4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC190Q86UF4 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC190Q86UF4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC190Q86UF4 MIR3665-201ENST00000578708 105 ntBASIC19.7■□□□□ 0.74
CCDC190Q86UF4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC190Q86UF4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC190Q86UF4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC190Q86UF4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC190Q86UF4 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.7■□□□□ 0.74
CCDC190Q86UF4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC190Q86UF4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC190Q86UF4 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC190Q86UF4 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC190Q86UF4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC190Q86UF4 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
CCDC190Q86UF4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC190Q86UF4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC190Q86UF4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC190Q86UF4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC190Q86UF4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC190Q86UF4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
CCDC190Q86UF4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC190Q86UF4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC190Q86UF4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC190Q86UF4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CCDC190Q86UF4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC190Q86UF4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC190Q86UF4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CCDC190Q86UF4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC190Q86UF4 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC190Q86UF4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC190Q86UF4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC190Q86UF4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC190Q86UF4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC190Q86UF4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CCDC190Q86UF4 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC190Q86UF4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC190Q86UF4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC190Q86UF4 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC190Q86UF4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC190Q86UF4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC190Q86UF4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC190Q86UF4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC190Q86UF4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC190Q86UF4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC190Q86UF4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CCDC190Q86UF4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC190Q86UF4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC190Q86UF4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC190Q86UF4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC190Q86UF4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC190Q86UF4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC190Q86UF4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CCDC190Q86UF4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC190Q86UF4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC190Q86UF4 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC190Q86UF4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CCDC190Q86UF4 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC190Q86UF4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC190Q86UF4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC190Q86UF4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC190Q86UF4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC190Q86UF4 AC079630.1-202ENST00000618127 1840 ntBASIC19.65■□□□□ 0.74
CCDC190Q86UF4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC190Q86UF4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC190Q86UF4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC190Q86UF4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC190Q86UF4 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC190Q86UF4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC190Q86UF4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC190Q86UF4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC190Q86UF4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CCDC190Q86UF4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CCDC190Q86UF4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC190Q86UF4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms