Protein–RNA interactions for Protein: Q86TJ5

ZNF554, Zinc finger protein 554, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554Q86TJ5 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
ZNF554Q86TJ5 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF554Q86TJ5 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF554Q86TJ5 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF554Q86TJ5 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
ZNF554Q86TJ5 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF554Q86TJ5 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
ZNF554Q86TJ5 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.29■□□□□ 0.84
ZNF554Q86TJ5 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF554Q86TJ5 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF554Q86TJ5 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF554Q86TJ5 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF554Q86TJ5 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF554Q86TJ5 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF554Q86TJ5 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF554Q86TJ5 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF554Q86TJ5 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF554Q86TJ5 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
ZNF554Q86TJ5 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF554Q86TJ5 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF554Q86TJ5 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF554Q86TJ5 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF554Q86TJ5 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF554Q86TJ5 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF554Q86TJ5 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ZNF554Q86TJ5 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF554Q86TJ5 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.27■□□□□ 0.84
ZNF554Q86TJ5 HLA-V-202ENST00000446817 847 ntBASIC20.27■□□□□ 0.84
ZNF554Q86TJ5 CR559946.2-201ENST00000623684 991 ntBASIC20.27■□□□□ 0.84
ZNF554Q86TJ5 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
ZNF554Q86TJ5 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF554Q86TJ5 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF554Q86TJ5 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF554Q86TJ5 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF554Q86TJ5 AC126177.7-201ENST00000547904 679 ntBASIC20.26■□□□□ 0.83
ZNF554Q86TJ5 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ZNF554Q86TJ5 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF554Q86TJ5 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF554Q86TJ5 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
ZNF554Q86TJ5 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ZNF554Q86TJ5 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF554Q86TJ5 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ZNF554Q86TJ5 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF554Q86TJ5 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF554Q86TJ5 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.25■□□□□ 0.83
ZNF554Q86TJ5 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.24■□□□□ 0.83
ZNF554Q86TJ5 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF554Q86TJ5 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ZNF554Q86TJ5 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
ZNF554Q86TJ5 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.24■□□□□ 0.83
ZNF554Q86TJ5 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.24■□□□□ 0.83
ZNF554Q86TJ5 AL359258.2-201ENST00000564063 1566 ntBASIC20.24■□□□□ 0.83
ZNF554Q86TJ5 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ZNF554Q86TJ5 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF554Q86TJ5 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.23■□□□□ 0.83
ZNF554Q86TJ5 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.23■□□□□ 0.83
ZNF554Q86TJ5 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF554Q86TJ5 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF554Q86TJ5 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF554Q86TJ5 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF554Q86TJ5 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.23■□□□□ 0.83
ZNF554Q86TJ5 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF554Q86TJ5 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF554Q86TJ5 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF554Q86TJ5 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.23■□□□□ 0.83
ZNF554Q86TJ5 MIR3648-2-201ENST00000581792 180 ntBASIC20.23■□□□□ 0.83
ZNF554Q86TJ5 MIR3648-1-201ENST00000615959 180 ntBASIC20.23■□□□□ 0.83
ZNF554Q86TJ5 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF554Q86TJ5 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF554Q86TJ5 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF554Q86TJ5 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF554Q86TJ5 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF554Q86TJ5 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF554Q86TJ5 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF554Q86TJ5 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF554Q86TJ5 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF554Q86TJ5 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.22■□□□□ 0.83
ZNF554Q86TJ5 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.22■□□□□ 0.83
ZNF554Q86TJ5 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF554Q86TJ5 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF554Q86TJ5 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF554Q86TJ5 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF554Q86TJ5 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.22■□□□□ 0.83
ZNF554Q86TJ5 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF554Q86TJ5 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.21■□□□□ 0.83
ZNF554Q86TJ5 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
ZNF554Q86TJ5 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.21■□□□□ 0.83
ZNF554Q86TJ5 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF554Q86TJ5 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF554Q86TJ5 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF554Q86TJ5 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF554Q86TJ5 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.21■□□□□ 0.83
ZNF554Q86TJ5 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ZNF554Q86TJ5 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.21■□□□□ 0.83
ZNF554Q86TJ5 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.21■□□□□ 0.83
ZNF554Q86TJ5 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF554Q86TJ5 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF554Q86TJ5 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF554Q86TJ5 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF554Q86TJ5 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms