Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC25.6■■□□□ 1.69
SHC4Q6S5L8 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
SHC4Q6S5L8 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SHC4Q6S5L8 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SHC4Q6S5L8 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SHC4Q6S5L8 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC25.59■■□□□ 1.69
SHC4Q6S5L8 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SHC4Q6S5L8 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SHC4Q6S5L8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.59■■□□□ 1.69
SHC4Q6S5L8 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SHC4Q6S5L8 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.59■■□□□ 1.69
SHC4Q6S5L8 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SHC4Q6S5L8 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SHC4Q6S5L8 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SHC4Q6S5L8 C1orf229-201ENST00000623686 2258 ntBASIC25.58■■□□□ 1.69
SHC4Q6S5L8 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SHC4Q6S5L8 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC25.58■■□□□ 1.69
SHC4Q6S5L8 YBX1P4-201ENST00000392794 808 ntBASIC25.58■■□□□ 1.69
SHC4Q6S5L8 SNX5-217ENST00000606557 1087 ntBASIC25.58■■□□□ 1.69
SHC4Q6S5L8 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
SHC4Q6S5L8 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SHC4Q6S5L8 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SHC4Q6S5L8 AC079630.1-202ENST00000618127 1840 ntBASIC25.58■■□□□ 1.68
SHC4Q6S5L8 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
SHC4Q6S5L8 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC25.58■■□□□ 1.68
SHC4Q6S5L8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
SHC4Q6S5L8 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
SHC4Q6S5L8 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SHC4Q6S5L8 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
SHC4Q6S5L8 USF2-207ENST00000595068 1612 ntTSL 5 BASIC25.57■■□□□ 1.68
SHC4Q6S5L8 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SHC4Q6S5L8 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC25.57■■□□□ 1.68
SHC4Q6S5L8 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC25.57■■□□□ 1.68
SHC4Q6S5L8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
SHC4Q6S5L8 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SHC4Q6S5L8 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC25.57■■□□□ 1.68
SHC4Q6S5L8 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
SHC4Q6S5L8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.56■■□□□ 1.68
SHC4Q6S5L8 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC25.56■■□□□ 1.68
SHC4Q6S5L8 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SHC4Q6S5L8 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SHC4Q6S5L8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
SHC4Q6S5L8 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.56■■□□□ 1.68
SHC4Q6S5L8 TK2-216ENST00000564917 1156 ntTSL 3 BASIC25.56■■□□□ 1.68
SHC4Q6S5L8 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SHC4Q6S5L8 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SHC4Q6S5L8 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC25.56■■□□□ 1.68
SHC4Q6S5L8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SHC4Q6S5L8 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
SHC4Q6S5L8 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC25.55■■□□□ 1.68
SHC4Q6S5L8 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC25.55■■□□□ 1.68
SHC4Q6S5L8 AC137630.3-201ENST00000607245 391 ntBASIC25.55■■□□□ 1.68
SHC4Q6S5L8 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
SHC4Q6S5L8 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC25.55■■□□□ 1.68
SHC4Q6S5L8 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SHC4Q6S5L8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SHC4Q6S5L8 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SHC4Q6S5L8 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC25.54■■□□□ 1.68
SHC4Q6S5L8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SHC4Q6S5L8 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC25.54■■□□□ 1.68
SHC4Q6S5L8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC25.54■■□□□ 1.68
SHC4Q6S5L8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC25.54■■□□□ 1.68
SHC4Q6S5L8 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
SHC4Q6S5L8 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SHC4Q6S5L8 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC25.53■■□□□ 1.68
SHC4Q6S5L8 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
SHC4Q6S5L8 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SHC4Q6S5L8 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC25.53■■□□□ 1.68
SHC4Q6S5L8 AL031848.2-201ENST00000607670 837 ntBASIC25.53■■□□□ 1.68
SHC4Q6S5L8 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SHC4Q6S5L8 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC25.53■■□□□ 1.68
SHC4Q6S5L8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
SHC4Q6S5L8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC25.52■■□□□ 1.68
SHC4Q6S5L8 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC25.52■■□□□ 1.68
SHC4Q6S5L8 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
SHC4Q6S5L8 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SHC4Q6S5L8 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC25.52■■□□□ 1.68
SHC4Q6S5L8 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SHC4Q6S5L8 TK2-202ENST00000417693 1046 ntTSL 2 BASIC25.52■■□□□ 1.68
SHC4Q6S5L8 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
SHC4Q6S5L8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
SHC4Q6S5L8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC25.51■■□□□ 1.67
SHC4Q6S5L8 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC25.51■■□□□ 1.67
SHC4Q6S5L8 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
SHC4Q6S5L8 LSM7-203ENST00000585409 512 ntTSL 2 BASIC25.51■■□□□ 1.67
SHC4Q6S5L8 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC25.51■■□□□ 1.67
SHC4Q6S5L8 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SHC4Q6S5L8 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SHC4Q6S5L8 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SHC4Q6S5L8 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SHC4Q6S5L8 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SHC4Q6S5L8 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SHC4Q6S5L8 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SHC4Q6S5L8 AC233723.2-201ENST00000623798 2106 ntBASIC25.49■■□□□ 1.67
SHC4Q6S5L8 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SHC4Q6S5L8 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SHC4Q6S5L8 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SHC4Q6S5L8 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SHC4Q6S5L8 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
SHC4Q6S5L8 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC25.48■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms