Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RTL6Q6ICC9 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.34■□□□□ 0.85
RTL6Q6ICC9 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.33■□□□□ 0.85
RTL6Q6ICC9 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
RTL6Q6ICC9 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.33■□□□□ 0.85
RTL6Q6ICC9 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RTL6Q6ICC9 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RTL6Q6ICC9 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.33■□□□□ 0.85
RTL6Q6ICC9 AF213884.3-201ENST00000563833 479 ntBASIC20.33■□□□□ 0.85
RTL6Q6ICC9 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
RTL6Q6ICC9 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.33■□□□□ 0.85
RTL6Q6ICC9 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RTL6Q6ICC9 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RTL6Q6ICC9 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RTL6Q6ICC9 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RTL6Q6ICC9 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RTL6Q6ICC9 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTL6Q6ICC9 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RTL6Q6ICC9 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTL6Q6ICC9 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.32■□□□□ 0.84
RTL6Q6ICC9 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.32■□□□□ 0.84
RTL6Q6ICC9 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTL6Q6ICC9 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RTL6Q6ICC9 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RTL6Q6ICC9 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RTL6Q6ICC9 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.32■□□□□ 0.84
RTL6Q6ICC9 AP001330.3-201ENST00000520123 633 ntBASIC20.32■□□□□ 0.84
RTL6Q6ICC9 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RTL6Q6ICC9 MIR4767-201ENST00000582827 78 ntBASIC20.32■□□□□ 0.84
RTL6Q6ICC9 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
RTL6Q6ICC9 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.32■□□□□ 0.84
RTL6Q6ICC9 C17orf82-201ENST00000623772 1530 ntBASIC20.32■□□□□ 0.84
RTL6Q6ICC9 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTL6Q6ICC9 AP003733.4-201ENST00000623785 1697 ntBASIC20.32■□□□□ 0.84
RTL6Q6ICC9 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
RTL6Q6ICC9 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.31■□□□□ 0.84
RTL6Q6ICC9 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.31■□□□□ 0.84
RTL6Q6ICC9 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTL6Q6ICC9 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTL6Q6ICC9 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTL6Q6ICC9 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTL6Q6ICC9 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RTL6Q6ICC9 MIR939-201ENST00000401314 82 ntBASIC20.31■□□□□ 0.84
RTL6Q6ICC9 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.31■□□□□ 0.84
RTL6Q6ICC9 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RTL6Q6ICC9 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.31■□□□□ 0.84
RTL6Q6ICC9 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTL6Q6ICC9 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.3■□□□□ 0.84
RTL6Q6ICC9 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.3■□□□□ 0.84
RTL6Q6ICC9 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTL6Q6ICC9 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RTL6Q6ICC9 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RTL6Q6ICC9 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTL6Q6ICC9 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTL6Q6ICC9 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.3■□□□□ 0.84
RTL6Q6ICC9 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RTL6Q6ICC9 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTL6Q6ICC9 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTL6Q6ICC9 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTL6Q6ICC9 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTL6Q6ICC9 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RTL6Q6ICC9 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.29■□□□□ 0.84
RTL6Q6ICC9 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.29■□□□□ 0.84
RTL6Q6ICC9 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.29■□□□□ 0.84
RTL6Q6ICC9 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.29■□□□□ 0.84
RTL6Q6ICC9 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.29■□□□□ 0.84
RTL6Q6ICC9 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RTL6Q6ICC9 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RTL6Q6ICC9 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RTL6Q6ICC9 AL161729.1-201ENST00000604104 1402 ntBASIC20.28■□□□□ 0.84
RTL6Q6ICC9 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RTL6Q6ICC9 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTL6Q6ICC9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
RTL6Q6ICC9 AC105265.2-201ENST00000467189 838 ntBASIC20.28■□□□□ 0.84
RTL6Q6ICC9 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTL6Q6ICC9 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
RTL6Q6ICC9 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTL6Q6ICC9 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.27■□□□□ 0.84
RTL6Q6ICC9 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTL6Q6ICC9 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
RTL6Q6ICC9 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTL6Q6ICC9 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.27■□□□□ 0.84
RTL6Q6ICC9 RARRES2P6-201ENST00000567333 442 ntBASIC20.27■□□□□ 0.84
RTL6Q6ICC9 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
RTL6Q6ICC9 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.27■□□□□ 0.84
RTL6Q6ICC9 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTL6Q6ICC9 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTL6Q6ICC9 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
RTL6Q6ICC9 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RTL6Q6ICC9 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
RTL6Q6ICC9 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTL6Q6ICC9 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTL6Q6ICC9 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTL6Q6ICC9 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RTL6Q6ICC9 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTL6Q6ICC9 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RTL6Q6ICC9 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.26■□□□□ 0.83
RTL6Q6ICC9 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.26■□□□□ 0.83
RTL6Q6ICC9 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.26■□□□□ 0.83
RTL6Q6ICC9 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms