Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HIST2H2AA3Q6FI13 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HIST2H2AA3Q6FI13 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
HIST2H2AA3Q6FI13 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.77■■□□□ 1.07
HIST2H2AA3Q6FI13 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
HIST2H2AA3Q6FI13 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HIST2H2AA3Q6FI13 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
HIST2H2AA3Q6FI13 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HIST2H2AA3Q6FI13 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
HIST2H2AA3Q6FI13 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HIST2H2AA3Q6FI13 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HIST2H2AA3Q6FI13 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.76■■□□□ 1.07
HIST2H2AA3Q6FI13 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
HIST2H2AA3Q6FI13 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
HIST2H2AA3Q6FI13 MTDHP2-201ENST00000601468 714 ntBASIC21.76■■□□□ 1.07
HIST2H2AA3Q6FI13 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
HIST2H2AA3Q6FI13 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
HIST2H2AA3Q6FI13 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HIST2H2AA3Q6FI13 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HIST2H2AA3Q6FI13 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HIST2H2AA3Q6FI13 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HIST2H2AA3Q6FI13 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
HIST2H2AA3Q6FI13 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
HIST2H2AA3Q6FI13 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
HIST2H2AA3Q6FI13 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HIST2H2AA3Q6FI13 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HIST2H2AA3Q6FI13 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
HIST2H2AA3Q6FI13 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.75■■□□□ 1.07
HIST2H2AA3Q6FI13 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.75■■□□□ 1.07
HIST2H2AA3Q6FI13 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
HIST2H2AA3Q6FI13 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
HIST2H2AA3Q6FI13 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.75■■□□□ 1.07
HIST2H2AA3Q6FI13 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.75■■□□□ 1.07
HIST2H2AA3Q6FI13 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HIST2H2AA3Q6FI13 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
HIST2H2AA3Q6FI13 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.75■■□□□ 1.07
HIST2H2AA3Q6FI13 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.75■■□□□ 1.07
HIST2H2AA3Q6FI13 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.75■■□□□ 1.07
HIST2H2AA3Q6FI13 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HIST2H2AA3Q6FI13 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
HIST2H2AA3Q6FI13 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
HIST2H2AA3Q6FI13 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.75■■□□□ 1.07
HIST2H2AA3Q6FI13 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.74■■□□□ 1.07
HIST2H2AA3Q6FI13 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HIST2H2AA3Q6FI13 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HIST2H2AA3Q6FI13 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
HIST2H2AA3Q6FI13 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.74■■□□□ 1.07
HIST2H2AA3Q6FI13 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HIST2H2AA3Q6FI13 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
HIST2H2AA3Q6FI13 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HIST2H2AA3Q6FI13 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HIST2H2AA3Q6FI13 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.74■■□□□ 1.07
HIST2H2AA3Q6FI13 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.74■■□□□ 1.07
HIST2H2AA3Q6FI13 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIST2H2AA3Q6FI13 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIST2H2AA3Q6FI13 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HIST2H2AA3Q6FI13 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIST2H2AA3Q6FI13 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HIST2H2AA3Q6FI13 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIST2H2AA3Q6FI13 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIST2H2AA3Q6FI13 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIST2H2AA3Q6FI13 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIST2H2AA3Q6FI13 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIST2H2AA3Q6FI13 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIST2H2AA3Q6FI13 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIST2H2AA3Q6FI13 AC092068.2-201ENST00000590491 1708 ntBASIC21.72■■□□□ 1.07
HIST2H2AA3Q6FI13 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HIST2H2AA3Q6FI13 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HIST2H2AA3Q6FI13 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HIST2H2AA3Q6FI13 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.72■■□□□ 1.07
HIST2H2AA3Q6FI13 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HIST2H2AA3Q6FI13 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.71■■□□□ 1.07
HIST2H2AA3Q6FI13 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.71■■□□□ 1.07
HIST2H2AA3Q6FI13 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
HIST2H2AA3Q6FI13 TSPY9P-201ENST00000440215 945 ntBASIC21.71■■□□□ 1.07
HIST2H2AA3Q6FI13 TSPY11P-201ENST00000442607 1045 ntBASIC21.71■■□□□ 1.07
HIST2H2AA3Q6FI13 AC010997.5-201ENST00000609182 354 ntBASIC21.71■■□□□ 1.07
HIST2H2AA3Q6FI13 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.71■■□□□ 1.07
HIST2H2AA3Q6FI13 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
HIST2H2AA3Q6FI13 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
HIST2H2AA3Q6FI13 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
HIST2H2AA3Q6FI13 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
HIST2H2AA3Q6FI13 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HIST2H2AA3Q6FI13 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HIST2H2AA3Q6FI13 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HIST2H2AA3Q6FI13 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HIST2H2AA3Q6FI13 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HIST2H2AA3Q6FI13 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.7■■□□□ 1.06
HIST2H2AA3Q6FI13 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.7■■□□□ 1.06
HIST2H2AA3Q6FI13 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HIST2H2AA3Q6FI13 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HIST2H2AA3Q6FI13 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.69■■□□□ 1.06
HIST2H2AA3Q6FI13 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HIST2H2AA3Q6FI13 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
HIST2H2AA3Q6FI13 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
HIST2H2AA3Q6FI13 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.69■■□□□ 1.06
HIST2H2AA3Q6FI13 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HIST2H2AA3Q6FI13 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
HIST2H2AA3Q6FI13 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HIST2H2AA3Q6FI13 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms