Protein–RNA interactions for Protein: Q5TB30

DEPDC1, DEP domain-containing protein 1A, humanhuman

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1Q5TB30 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.77■■□□□ 1.08
DEPDC1Q5TB30 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DEPDC1Q5TB30 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.77■■□□□ 1.08
DEPDC1Q5TB30 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
DEPDC1Q5TB30 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DEPDC1Q5TB30 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
DEPDC1Q5TB30 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DEPDC1Q5TB30 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.76■■□□□ 1.07
DEPDC1Q5TB30 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DEPDC1Q5TB30 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DEPDC1Q5TB30 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DEPDC1Q5TB30 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DEPDC1Q5TB30 AL451085.2-201ENST00000605085 799 ntBASIC21.76■■□□□ 1.07
DEPDC1Q5TB30 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.76■■□□□ 1.07
DEPDC1Q5TB30 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DEPDC1Q5TB30 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
DEPDC1Q5TB30 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
DEPDC1Q5TB30 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
DEPDC1Q5TB30 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
DEPDC1Q5TB30 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DEPDC1Q5TB30 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
DEPDC1Q5TB30 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
DEPDC1Q5TB30 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
DEPDC1Q5TB30 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
DEPDC1Q5TB30 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DEPDC1Q5TB30 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
DEPDC1Q5TB30 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DEPDC1Q5TB30 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
DEPDC1Q5TB30 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.74■■□□□ 1.07
DEPDC1Q5TB30 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.74■■□□□ 1.07
DEPDC1Q5TB30 AC009299.2-201ENST00000482477 511 ntBASIC21.74■■□□□ 1.07
DEPDC1Q5TB30 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
DEPDC1Q5TB30 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.74■■□□□ 1.07
DEPDC1Q5TB30 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.74■■□□□ 1.07
DEPDC1Q5TB30 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
DEPDC1Q5TB30 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
DEPDC1Q5TB30 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DEPDC1Q5TB30 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DEPDC1Q5TB30 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DEPDC1Q5TB30 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DEPDC1Q5TB30 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DEPDC1Q5TB30 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.73■■□□□ 1.07
DEPDC1Q5TB30 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.73■■□□□ 1.07
DEPDC1Q5TB30 KRT125P-201ENST00000546827 989 ntBASIC21.73■■□□□ 1.07
DEPDC1Q5TB30 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.73■■□□□ 1.07
DEPDC1Q5TB30 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DEPDC1Q5TB30 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DEPDC1Q5TB30 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
DEPDC1Q5TB30 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
DEPDC1Q5TB30 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
DEPDC1Q5TB30 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
DEPDC1Q5TB30 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.72■■□□□ 1.07
DEPDC1Q5TB30 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DEPDC1Q5TB30 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
DEPDC1Q5TB30 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
DEPDC1Q5TB30 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
DEPDC1Q5TB30 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
DEPDC1Q5TB30 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.72■■□□□ 1.07
DEPDC1Q5TB30 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.72■■□□□ 1.07
DEPDC1Q5TB30 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
DEPDC1Q5TB30 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
DEPDC1Q5TB30 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DEPDC1Q5TB30 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.71■■□□□ 1.07
DEPDC1Q5TB30 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DEPDC1Q5TB30 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DEPDC1Q5TB30 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
DEPDC1Q5TB30 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
DEPDC1Q5TB30 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DEPDC1Q5TB30 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.71■■□□□ 1.07
DEPDC1Q5TB30 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.71■■□□□ 1.07
DEPDC1Q5TB30 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DEPDC1Q5TB30 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DEPDC1Q5TB30 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DEPDC1Q5TB30 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.71■■□□□ 1.07
DEPDC1Q5TB30 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.7■■□□□ 1.06
DEPDC1Q5TB30 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
DEPDC1Q5TB30 AC239859.2-201ENST00000444165 318 ntBASIC21.7■■□□□ 1.06
DEPDC1Q5TB30 AC092028.1-203ENST00000608262 953 ntBASIC21.7■■□□□ 1.06
DEPDC1Q5TB30 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DEPDC1Q5TB30 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DEPDC1Q5TB30 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DEPDC1Q5TB30 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
DEPDC1Q5TB30 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DEPDC1Q5TB30 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
DEPDC1Q5TB30 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DEPDC1Q5TB30 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.69■■□□□ 1.06
DEPDC1Q5TB30 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DEPDC1Q5TB30 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DEPDC1Q5TB30 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
DEPDC1Q5TB30 MIR4787-201ENST00000607364 84 ntBASIC21.69■■□□□ 1.06
DEPDC1Q5TB30 MIR6722-201ENST00000617286 78 ntBASIC21.69■■□□□ 1.06
DEPDC1Q5TB30 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.69■■□□□ 1.06
DEPDC1Q5TB30 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
DEPDC1Q5TB30 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
DEPDC1Q5TB30 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DEPDC1Q5TB30 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.69■■□□□ 1.06
DEPDC1Q5TB30 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
DEPDC1Q5TB30 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DEPDC1Q5TB30 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.68■■□□□ 1.06
DEPDC1Q5TB30 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms