Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC091060.1-201ENST00000623524 1766 ntBASIC19.97■□□□□ 0.79
LRRK2Q5S007 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.97■□□□□ 0.79
LRRK2Q5S007 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.97■□□□□ 0.79
LRRK2Q5S007 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRK2Q5S007 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.97■□□□□ 0.79
LRRK2Q5S007 GUSBP6-202ENST00000438529 1198 ntBASIC19.97■□□□□ 0.79
LRRK2Q5S007 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LRRK2Q5S007 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LRRK2Q5S007 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.97■□□□□ 0.79
LRRK2Q5S007 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
LRRK2Q5S007 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LRRK2Q5S007 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LRRK2Q5S007 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LRRK2Q5S007 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.96■□□□□ 0.79
LRRK2Q5S007 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.96■□□□□ 0.79
LRRK2Q5S007 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LRRK2Q5S007 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LRRK2Q5S007 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
LRRK2Q5S007 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.96■□□□□ 0.79
LRRK2Q5S007 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRK2Q5S007 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
LRRK2Q5S007 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
LRRK2Q5S007 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LRRK2Q5S007 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.96■□□□□ 0.79
LRRK2Q5S007 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.96■□□□□ 0.79
LRRK2Q5S007 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRK2Q5S007 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LRRK2Q5S007 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.95■□□□□ 0.78
LRRK2Q5S007 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LRRK2Q5S007 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LRRK2Q5S007 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
LRRK2Q5S007 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.95■□□□□ 0.78
LRRK2Q5S007 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRRK2Q5S007 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.94■□□□□ 0.78
LRRK2Q5S007 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.94■□□□□ 0.78
LRRK2Q5S007 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRK2Q5S007 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.94■□□□□ 0.78
LRRK2Q5S007 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRK2Q5S007 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.94■□□□□ 0.78
LRRK2Q5S007 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRRK2Q5S007 AC009086.3-201ENST00000623486 1008 ntBASIC19.94■□□□□ 0.78
LRRK2Q5S007 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.94■□□□□ 0.78
LRRK2Q5S007 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.94■□□□□ 0.78
LRRK2Q5S007 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
LRRK2Q5S007 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
LRRK2Q5S007 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRK2Q5S007 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
LRRK2Q5S007 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LRRK2Q5S007 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
LRRK2Q5S007 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.93■□□□□ 0.78
LRRK2Q5S007 AC087239.1-201ENST00000622671 572 ntBASIC19.93■□□□□ 0.78
LRRK2Q5S007 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.93■□□□□ 0.78
LRRK2Q5S007 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LRRK2Q5S007 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRK2Q5S007 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
LRRK2Q5S007 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
LRRK2Q5S007 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.93■□□□□ 0.78
LRRK2Q5S007 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.93■□□□□ 0.78
LRRK2Q5S007 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRK2Q5S007 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRRK2Q5S007 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.92■□□□□ 0.78
LRRK2Q5S007 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.92■□□□□ 0.78
LRRK2Q5S007 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRK2Q5S007 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRK2Q5S007 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRK2Q5S007 AC069152.1-201ENST00000438030 544 ntBASIC19.92■□□□□ 0.78
LRRK2Q5S007 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.92■□□□□ 0.78
LRRK2Q5S007 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.92■□□□□ 0.78
LRRK2Q5S007 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
LRRK2Q5S007 pRNA.6-201ENST00000610482 90 ntBASIC19.92■□□□□ 0.78
LRRK2Q5S007 pRNA.5-201ENST00000612139 90 ntBASIC19.92■□□□□ 0.78
LRRK2Q5S007 pRNA.11-201ENST00000618423 90 ntBASIC19.92■□□□□ 0.78
LRRK2Q5S007 pRNA.13-201ENST00000619112 90 ntBASIC19.92■□□□□ 0.78
LRRK2Q5S007 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.92■□□□□ 0.78
LRRK2Q5S007 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.92■□□□□ 0.78
LRRK2Q5S007 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRK2Q5S007 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
LRRK2Q5S007 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRRK2Q5S007 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.91■□□□□ 0.78
LRRK2Q5S007 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRK2Q5S007 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.91■□□□□ 0.78
LRRK2Q5S007 MFSD11-216ENST00000590393 1141 ntBASIC19.91■□□□□ 0.78
LRRK2Q5S007 TPRG1LP1-201ENST00000598702 760 ntBASIC19.91■□□□□ 0.78
LRRK2Q5S007 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.91■□□□□ 0.78
LRRK2Q5S007 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRK2Q5S007 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.91■□□□□ 0.78
LRRK2Q5S007 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.91■□□□□ 0.78
LRRK2Q5S007 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRK2Q5S007 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.9■□□□□ 0.78
LRRK2Q5S007 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRK2Q5S007 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRK2Q5S007 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
LRRK2Q5S007 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
LRRK2Q5S007 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.89■□□□□ 0.78
LRRK2Q5S007 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRK2Q5S007 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LRRK2Q5S007 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.89■□□□□ 0.77
LRRK2Q5S007 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LRRK2Q5S007 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRK2Q5S007 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms