Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
KRTCAP3Q53RY4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.33■□□□□ 0.84
KRTCAP3Q53RY4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
KRTCAP3Q53RY4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.32■□□□□ 0.84
KRTCAP3Q53RY4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.32■□□□□ 0.84
KRTCAP3Q53RY4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.32■□□□□ 0.84
KRTCAP3Q53RY4 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.32■□□□□ 0.84
KRTCAP3Q53RY4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.32■□□□□ 0.84
KRTCAP3Q53RY4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.32■□□□□ 0.84
KRTCAP3Q53RY4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KRTCAP3Q53RY4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRTCAP3Q53RY4 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KRTCAP3Q53RY4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.31■□□□□ 0.84
KRTCAP3Q53RY4 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRTCAP3Q53RY4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.31■□□□□ 0.84
KRTCAP3Q53RY4 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KRTCAP3Q53RY4 AP003733.4-201ENST00000623785 1697 ntBASIC20.31■□□□□ 0.84
KRTCAP3Q53RY4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRTCAP3Q53RY4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.31■□□□□ 0.84
KRTCAP3Q53RY4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.31■□□□□ 0.84
KRTCAP3Q53RY4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.3■□□□□ 0.84
KRTCAP3Q53RY4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRTCAP3Q53RY4 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRTCAP3Q53RY4 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
KRTCAP3Q53RY4 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.3■□□□□ 0.84
KRTCAP3Q53RY4 AL162430.1-201ENST00000480705 870 ntBASIC20.3■□□□□ 0.84
KRTCAP3Q53RY4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.3■□□□□ 0.84
KRTCAP3Q53RY4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.3■□□□□ 0.84
KRTCAP3Q53RY4 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KRTCAP3Q53RY4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KRTCAP3Q53RY4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
KRTCAP3Q53RY4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KRTCAP3Q53RY4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.29■□□□□ 0.84
KRTCAP3Q53RY4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRTCAP3Q53RY4 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRTCAP3Q53RY4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KRTCAP3Q53RY4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRTCAP3Q53RY4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.28■□□□□ 0.84
KRTCAP3Q53RY4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.28■□□□□ 0.84
KRTCAP3Q53RY4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
KRTCAP3Q53RY4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KRTCAP3Q53RY4 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KRTCAP3Q53RY4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
KRTCAP3Q53RY4 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRTCAP3Q53RY4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
KRTCAP3Q53RY4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRTCAP3Q53RY4 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRTCAP3Q53RY4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.27■□□□□ 0.84
KRTCAP3Q53RY4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.27■□□□□ 0.84
KRTCAP3Q53RY4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRTCAP3Q53RY4 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
KRTCAP3Q53RY4 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.27■□□□□ 0.84
KRTCAP3Q53RY4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
KRTCAP3Q53RY4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
KRTCAP3Q53RY4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.27■□□□□ 0.83
KRTCAP3Q53RY4 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.27■□□□□ 0.83
KRTCAP3Q53RY4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRTCAP3Q53RY4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRTCAP3Q53RY4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KRTCAP3Q53RY4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRTCAP3Q53RY4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
KRTCAP3Q53RY4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.26■□□□□ 0.83
KRTCAP3Q53RY4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRTCAP3Q53RY4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.26■□□□□ 0.83
KRTCAP3Q53RY4 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRTCAP3Q53RY4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KRTCAP3Q53RY4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
KRTCAP3Q53RY4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.25■□□□□ 0.83
KRTCAP3Q53RY4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRTCAP3Q53RY4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KRTCAP3Q53RY4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.25■□□□□ 0.83
KRTCAP3Q53RY4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.25■□□□□ 0.83
KRTCAP3Q53RY4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.25■□□□□ 0.83
KRTCAP3Q53RY4 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.25■□□□□ 0.83
KRTCAP3Q53RY4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KRTCAP3Q53RY4 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
KRTCAP3Q53RY4 FP325331.1-202ENST00000623531 1380 ntBASIC20.24■□□□□ 0.83
KRTCAP3Q53RY4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRTCAP3Q53RY4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.24■□□□□ 0.83
KRTCAP3Q53RY4 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRTCAP3Q53RY4 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRTCAP3Q53RY4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
KRTCAP3Q53RY4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRTCAP3Q53RY4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
KRTCAP3Q53RY4 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.23■□□□□ 0.83
KRTCAP3Q53RY4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KRTCAP3Q53RY4 AC034268.1-201ENST00000441047 882 ntBASIC20.23■□□□□ 0.83
KRTCAP3Q53RY4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.23■□□□□ 0.83
KRTCAP3Q53RY4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.23■□□□□ 0.83
KRTCAP3Q53RY4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.23■□□□□ 0.83
KRTCAP3Q53RY4 AL358852.1-201ENST00000623174 1268 ntBASIC20.23■□□□□ 0.83
KRTCAP3Q53RY4 TSPY26P-201ENST00000476365 1326 ntBASIC20.23■□□□□ 0.83
KRTCAP3Q53RY4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KRTCAP3Q53RY4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRTCAP3Q53RY4 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRTCAP3Q53RY4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRTCAP3Q53RY4 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.22■□□□□ 0.83
KRTCAP3Q53RY4 SLC47A1P1-202ENST00000449666 945 ntBASIC20.22■□□□□ 0.83
KRTCAP3Q53RY4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.22■□□□□ 0.83
KRTCAP3Q53RY4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms