Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC027682.1-201ENST00000562846 899 ntBASIC26.62■■□□□ 1.85
SHROOM1Q2M3G4 AC241377.3-202ENST00000626088 1088 ntBASIC26.62■■□□□ 1.85
SHROOM1Q2M3G4 AC241585.3-202ENST00000628937 1088 ntBASIC26.62■■□□□ 1.85
SHROOM1Q2M3G4 AC245100.8-202ENST00000629247 1058 ntBASIC26.62■■□□□ 1.85
SHROOM1Q2M3G4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SHROOM1Q2M3G4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
SHROOM1Q2M3G4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC26.61■■□□□ 1.85
SHROOM1Q2M3G4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC26.61■■□□□ 1.85
SHROOM1Q2M3G4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC26.61■■□□□ 1.85
SHROOM1Q2M3G4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC26.61■■□□□ 1.85
SHROOM1Q2M3G4 AL161729.1-201ENST00000604104 1402 ntBASIC26.61■■□□□ 1.85
SHROOM1Q2M3G4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SHROOM1Q2M3G4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SHROOM1Q2M3G4 AP003733.4-201ENST00000623785 1697 ntBASIC26.6■■□□□ 1.85
SHROOM1Q2M3G4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
SHROOM1Q2M3G4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SHROOM1Q2M3G4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
SHROOM1Q2M3G4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC26.6■■□□□ 1.85
SHROOM1Q2M3G4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SHROOM1Q2M3G4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC26.6■■□□□ 1.85
SHROOM1Q2M3G4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SHROOM1Q2M3G4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SHROOM1Q2M3G4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC26.6■■□□□ 1.85
SHROOM1Q2M3G4 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.6■■□□□ 1.85
SHROOM1Q2M3G4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SHROOM1Q2M3G4 AC087623.3-201ENST00000607047 1098 ntBASIC26.59■■□□□ 1.85
SHROOM1Q2M3G4 pRNA.6-201ENST00000610482 90 ntBASIC26.59■■□□□ 1.85
SHROOM1Q2M3G4 pRNA.5-201ENST00000612139 90 ntBASIC26.59■■□□□ 1.85
SHROOM1Q2M3G4 AC092666.2-201ENST00000613287 246 ntBASIC26.59■■□□□ 1.85
SHROOM1Q2M3G4 pRNA.11-201ENST00000618423 90 ntBASIC26.59■■□□□ 1.85
SHROOM1Q2M3G4 pRNA.13-201ENST00000619112 90 ntBASIC26.59■■□□□ 1.85
SHROOM1Q2M3G4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SHROOM1Q2M3G4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SHROOM1Q2M3G4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
SHROOM1Q2M3G4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SHROOM1Q2M3G4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC26.58■■□□□ 1.85
SHROOM1Q2M3G4 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
SHROOM1Q2M3G4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC26.57■■□□□ 1.84
SHROOM1Q2M3G4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
SHROOM1Q2M3G4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC26.57■■□□□ 1.84
SHROOM1Q2M3G4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SHROOM1Q2M3G4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC26.57■■□□□ 1.84
SHROOM1Q2M3G4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC26.57■■□□□ 1.84
SHROOM1Q2M3G4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SHROOM1Q2M3G4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
SHROOM1Q2M3G4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC26.57■■□□□ 1.84
SHROOM1Q2M3G4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SHROOM1Q2M3G4 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SHROOM1Q2M3G4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SHROOM1Q2M3G4 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.56■■□□□ 1.84
SHROOM1Q2M3G4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC26.56■■□□□ 1.84
SHROOM1Q2M3G4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC26.56■■□□□ 1.84
SHROOM1Q2M3G4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC26.56■■□□□ 1.84
SHROOM1Q2M3G4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC26.56■■□□□ 1.84
SHROOM1Q2M3G4 AC142381.3-201ENST00000568208 1670 ntBASIC26.56■■□□□ 1.84
SHROOM1Q2M3G4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC26.56■■□□□ 1.84
SHROOM1Q2M3G4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
SHROOM1Q2M3G4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
SHROOM1Q2M3G4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC26.55■■□□□ 1.84
SHROOM1Q2M3G4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SHROOM1Q2M3G4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
SHROOM1Q2M3G4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
SHROOM1Q2M3G4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC26.55■■□□□ 1.84
SHROOM1Q2M3G4 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SHROOM1Q2M3G4 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SHROOM1Q2M3G4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SHROOM1Q2M3G4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC26.54■■□□□ 1.84
SHROOM1Q2M3G4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC26.54■■□□□ 1.84
SHROOM1Q2M3G4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
SHROOM1Q2M3G4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
SHROOM1Q2M3G4 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SHROOM1Q2M3G4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC26.54■■□□□ 1.84
SHROOM1Q2M3G4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
SHROOM1Q2M3G4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC26.53■■□□□ 1.84
SHROOM1Q2M3G4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC26.53■■□□□ 1.84
SHROOM1Q2M3G4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC26.53■■□□□ 1.84
SHROOM1Q2M3G4 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
SHROOM1Q2M3G4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
SHROOM1Q2M3G4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC26.53■■□□□ 1.84
SHROOM1Q2M3G4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC26.53■■□□□ 1.84
SHROOM1Q2M3G4 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
SHROOM1Q2M3G4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC26.52■■□□□ 1.84
SHROOM1Q2M3G4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SHROOM1Q2M3G4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
SHROOM1Q2M3G4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
SHROOM1Q2M3G4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC26.52■■□□□ 1.84
SHROOM1Q2M3G4 AC233992.3-201ENST00000607491 485 ntBASIC26.52■■□□□ 1.84
SHROOM1Q2M3G4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
SHROOM1Q2M3G4 MIR6821-201ENST00000617625 74 ntBASIC26.52■■□□□ 1.84
SHROOM1Q2M3G4 ANKRD20A6P-201ENST00000618763 204 ntBASIC26.52■■□□□ 1.84
SHROOM1Q2M3G4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.84
SHROOM1Q2M3G4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SHROOM1Q2M3G4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC26.51■■□□□ 1.83
SHROOM1Q2M3G4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SHROOM1Q2M3G4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
SHROOM1Q2M3G4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC26.51■■□□□ 1.83
SHROOM1Q2M3G4 MIR5787-201ENST00000611784 55 ntBASIC26.51■■□□□ 1.83
SHROOM1Q2M3G4 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SHROOM1Q2M3G4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC26.51■■□□□ 1.83
SHROOM1Q2M3G4 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms