Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PDS5AQ29RF7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
PDS5AQ29RF7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
PDS5AQ29RF7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
PDS5AQ29RF7 AC091305.1-201ENST00000479476 895 ntBASIC27.36■■□□□ 1.97
PDS5AQ29RF7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC27.36■■□□□ 1.97
PDS5AQ29RF7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PDS5AQ29RF7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
PDS5AQ29RF7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC27.35■■□□□ 1.97
PDS5AQ29RF7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
PDS5AQ29RF7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC27.35■■□□□ 1.97
PDS5AQ29RF7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PDS5AQ29RF7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PDS5AQ29RF7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
PDS5AQ29RF7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
PDS5AQ29RF7 MIR935-201ENST00000401179 91 ntBASIC27.34■■□□□ 1.97
PDS5AQ29RF7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
PDS5AQ29RF7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC27.33■■□□□ 1.97
PDS5AQ29RF7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
PDS5AQ29RF7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
PDS5AQ29RF7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC27.33■■□□□ 1.97
PDS5AQ29RF7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PDS5AQ29RF7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PDS5AQ29RF7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PDS5AQ29RF7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC27.33■■□□□ 1.97
PDS5AQ29RF7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PDS5AQ29RF7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
PDS5AQ29RF7 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PDS5AQ29RF7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC27.32■■□□□ 1.96
PDS5AQ29RF7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
PDS5AQ29RF7 ZNRF2P3-201ENST00000424200 374 ntBASIC27.32■■□□□ 1.96
PDS5AQ29RF7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
PDS5AQ29RF7 AC027682.1-201ENST00000562846 899 ntBASIC27.32■■□□□ 1.96
PDS5AQ29RF7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC27.32■■□□□ 1.96
PDS5AQ29RF7 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PDS5AQ29RF7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PDS5AQ29RF7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
PDS5AQ29RF7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PDS5AQ29RF7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PDS5AQ29RF7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PDS5AQ29RF7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PDS5AQ29RF7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
PDS5AQ29RF7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PDS5AQ29RF7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC27.3■■□□□ 1.96
PDS5AQ29RF7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC27.3■■□□□ 1.96
PDS5AQ29RF7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC27.3■■□□□ 1.96
PDS5AQ29RF7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC27.3■■□□□ 1.96
PDS5AQ29RF7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC27.3■■□□□ 1.96
PDS5AQ29RF7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PDS5AQ29RF7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
PDS5AQ29RF7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
PDS5AQ29RF7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PDS5AQ29RF7 RASA4CP-201ENST00000424092 1398 ntBASIC27.29■■□□□ 1.96
PDS5AQ29RF7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
PDS5AQ29RF7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
PDS5AQ29RF7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
PDS5AQ29RF7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC27.29■■□□□ 1.96
PDS5AQ29RF7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
PDS5AQ29RF7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
PDS5AQ29RF7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PDS5AQ29RF7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PDS5AQ29RF7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC27.29■■□□□ 1.96
PDS5AQ29RF7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PDS5AQ29RF7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
PDS5AQ29RF7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PDS5AQ29RF7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC27.28■■□□□ 1.96
PDS5AQ29RF7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC27.28■■□□□ 1.96
PDS5AQ29RF7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
PDS5AQ29RF7 AL139125.2-201ENST00000623134 1869 ntBASIC27.28■■□□□ 1.96
PDS5AQ29RF7 FP325331.1-202ENST00000623531 1380 ntBASIC27.28■■□□□ 1.96
PDS5AQ29RF7 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PDS5AQ29RF7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PDS5AQ29RF7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC27.28■■□□□ 1.96
PDS5AQ29RF7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
PDS5AQ29RF7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
PDS5AQ29RF7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
PDS5AQ29RF7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC27.27■■□□□ 1.96
PDS5AQ29RF7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
PDS5AQ29RF7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PDS5AQ29RF7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PDS5AQ29RF7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
PDS5AQ29RF7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC27.26■■□□□ 1.95
PDS5AQ29RF7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC27.26■■□□□ 1.95
PDS5AQ29RF7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PDS5AQ29RF7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC27.26■■□□□ 1.95
PDS5AQ29RF7 pRNA.6-201ENST00000610482 90 ntBASIC27.26■■□□□ 1.95
PDS5AQ29RF7 CA15P2-201ENST00000611168 834 ntBASIC27.26■■□□□ 1.95
PDS5AQ29RF7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PDS5AQ29RF7 pRNA.5-201ENST00000612139 90 ntBASIC27.26■■□□□ 1.95
PDS5AQ29RF7 pRNA.11-201ENST00000618423 90 ntBASIC27.26■■□□□ 1.95
PDS5AQ29RF7 pRNA.13-201ENST00000619112 90 ntBASIC27.26■■□□□ 1.95
PDS5AQ29RF7 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
PDS5AQ29RF7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
PDS5AQ29RF7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
PDS5AQ29RF7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC27.25■■□□□ 1.95
PDS5AQ29RF7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC27.25■■□□□ 1.95
PDS5AQ29RF7 AC105265.2-201ENST00000467189 838 ntBASIC27.25■■□□□ 1.95
PDS5AQ29RF7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
PDS5AQ29RF7 MAG-206ENST00000597035 542 ntTSL 4 BASIC27.25■■□□□ 1.95
PDS5AQ29RF7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC27.25■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms