Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
COL16A1Q07092 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC31.19■■■□□ 2.58
COL16A1Q07092 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
COL16A1Q07092 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
COL16A1Q07092 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC31.18■■■□□ 2.58
COL16A1Q07092 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
COL16A1Q07092 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
COL16A1Q07092 AC142086.2-201ENST00000569753 217 ntBASIC31.18■■■□□ 2.58
COL16A1Q07092 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
COL16A1Q07092 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
COL16A1Q07092 GALNS-213ENST00000569433 723 ntTSL 3 BASIC31.17■■■□□ 2.58
COL16A1Q07092 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC31.17■■■□□ 2.58
COL16A1Q07092 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
COL16A1Q07092 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
COL16A1Q07092 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
COL16A1Q07092 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
COL16A1Q07092 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC31.16■■■□□ 2.58
COL16A1Q07092 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC31.16■■■□□ 2.58
COL16A1Q07092 MIR4651-201ENST00000582622 73 ntBASIC31.16■■■□□ 2.58
COL16A1Q07092 WT1-AS_3.1-201ENST00000613262 234 ntBASIC31.16■■■□□ 2.58
COL16A1Q07092 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
COL16A1Q07092 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
COL16A1Q07092 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC31.16■■■□□ 2.58
COL16A1Q07092 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
COL16A1Q07092 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
COL16A1Q07092 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC31.15■■■□□ 2.58
COL16A1Q07092 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
COL16A1Q07092 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
COL16A1Q07092 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
COL16A1Q07092 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC31.15■■■□□ 2.58
COL16A1Q07092 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
COL16A1Q07092 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC31.14■■■□□ 2.58
COL16A1Q07092 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC31.14■■■□□ 2.58
COL16A1Q07092 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC31.14■■■□□ 2.57
COL16A1Q07092 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
COL16A1Q07092 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
COL16A1Q07092 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
COL16A1Q07092 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
COL16A1Q07092 MPST-204ENST00000404393 1329 ntTSL 5 BASIC31.12■■■□□ 2.57
COL16A1Q07092 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
COL16A1Q07092 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC31.11■■■□□ 2.57
COL16A1Q07092 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC31.11■■■□□ 2.57
COL16A1Q07092 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC31.11■■■□□ 2.57
COL16A1Q07092 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC31.11■■■□□ 2.57
COL16A1Q07092 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
COL16A1Q07092 LHPP-203ENST00000392757 840 ntTSL 3 BASIC31.11■■■□□ 2.57
COL16A1Q07092 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC31.11■■■□□ 2.57
COL16A1Q07092 KRT18P6-201ENST00000555540 1265 ntBASIC31.11■■■□□ 2.57
COL16A1Q07092 TPRG1LP1-201ENST00000598702 760 ntBASIC31.11■■■□□ 2.57
COL16A1Q07092 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
COL16A1Q07092 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
COL16A1Q07092 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
COL16A1Q07092 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC31.1■■■□□ 2.57
COL16A1Q07092 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC31.1■■■□□ 2.57
COL16A1Q07092 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
COL16A1Q07092 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
COL16A1Q07092 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
COL16A1Q07092 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
COL16A1Q07092 DET1-205ENST00000558413 583 ntTSL 4 BASIC31.09■■■□□ 2.57
COL16A1Q07092 AC010525.1-201ENST00000585559 441 ntBASIC31.09■■■□□ 2.57
COL16A1Q07092 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC31.09■■■□□ 2.57
COL16A1Q07092 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
COL16A1Q07092 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC31.09■■■□□ 2.57
COL16A1Q07092 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC31.08■■■□□ 2.57
COL16A1Q07092 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
COL16A1Q07092 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
COL16A1Q07092 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
COL16A1Q07092 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
COL16A1Q07092 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
COL16A1Q07092 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
COL16A1Q07092 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
COL16A1Q07092 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC31.07■■■□□ 2.56
COL16A1Q07092 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
COL16A1Q07092 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC31.07■■■□□ 2.56
COL16A1Q07092 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC31.07■■■□□ 2.56
COL16A1Q07092 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
COL16A1Q07092 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC31.07■■■□□ 2.56
COL16A1Q07092 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC31.07■■■□□ 2.56
COL16A1Q07092 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
COL16A1Q07092 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC31.06■■■□□ 2.56
COL16A1Q07092 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
COL16A1Q07092 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC31.06■■■□□ 2.56
COL16A1Q07092 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
COL16A1Q07092 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC31.06■■■□□ 2.56
COL16A1Q07092 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
COL16A1Q07092 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
COL16A1Q07092 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC31.05■■■□□ 2.56
COL16A1Q07092 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
COL16A1Q07092 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
COL16A1Q07092 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC31.05■■■□□ 2.56
COL16A1Q07092 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC31.05■■■□□ 2.56
COL16A1Q07092 GUSBP6-202ENST00000438529 1198 ntBASIC31.05■■■□□ 2.56
COL16A1Q07092 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC31.05■■■□□ 2.56
COL16A1Q07092 PARP1-210ENST00000629232 477 ntTSL 5 BASIC31.05■■■□□ 2.56
COL16A1Q07092 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
COL16A1Q07092 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC31.04■■■□□ 2.56
COL16A1Q07092 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC31.04■■■□□ 2.56
COL16A1Q07092 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
COL16A1Q07092 GPX1P1-201ENST00000388829 606 ntBASIC31.04■■■□□ 2.56
COL16A1Q07092 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC31.04■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms