Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
WNT3P56703 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.44■■□□□ 1.02
WNT3P56703 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
WNT3P56703 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
WNT3P56703 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
WNT3P56703 AC079834.2-201ENST00000609776 1949 ntBASIC21.43■■□□□ 1.02
WNT3P56703 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
WNT3P56703 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
WNT3P56703 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.43■■□□□ 1.02
WNT3P56703 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
WNT3P56703 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
WNT3P56703 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.43■■□□□ 1.02
WNT3P56703 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
WNT3P56703 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.43■■□□□ 1.02
WNT3P56703 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.43■■□□□ 1.02
WNT3P56703 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.43■■□□□ 1.02
WNT3P56703 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
WNT3P56703 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
WNT3P56703 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
WNT3P56703 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
WNT3P56703 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
WNT3P56703 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
WNT3P56703 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
WNT3P56703 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
WNT3P56703 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
WNT3P56703 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
WNT3P56703 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
WNT3P56703 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
WNT3P56703 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
WNT3P56703 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
WNT3P56703 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.42■■□□□ 1.02
WNT3P56703 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.42■■□□□ 1.02
WNT3P56703 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
WNT3P56703 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
WNT3P56703 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
WNT3P56703 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
WNT3P56703 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
WNT3P56703 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.41■■□□□ 1.02
WNT3P56703 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.41■■□□□ 1.02
WNT3P56703 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
WNT3P56703 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
WNT3P56703 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
WNT3P56703 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
WNT3P56703 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.41■■□□□ 1.02
WNT3P56703 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
WNT3P56703 C1orf229-201ENST00000623686 2258 ntBASIC21.4■■□□□ 1.02
WNT3P56703 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
WNT3P56703 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
WNT3P56703 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.4■■□□□ 1.02
WNT3P56703 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
WNT3P56703 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
WNT3P56703 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
WNT3P56703 AC004448.1-201ENST00000458332 883 ntBASIC21.4■■□□□ 1.02
WNT3P56703 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.4■■□□□ 1.02
WNT3P56703 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.4■■□□□ 1.02
WNT3P56703 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
WNT3P56703 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.4■■□□□ 1.02
WNT3P56703 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
WNT3P56703 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
WNT3P56703 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
WNT3P56703 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
WNT3P56703 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
WNT3P56703 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
WNT3P56703 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
WNT3P56703 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.39■■□□□ 1.01
WNT3P56703 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
WNT3P56703 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.38■■□□□ 1.01
WNT3P56703 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.38■■□□□ 1.01
WNT3P56703 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
WNT3P56703 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
WNT3P56703 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
WNT3P56703 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.38■■□□□ 1.01
WNT3P56703 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
WNT3P56703 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.38■■□□□ 1.01
WNT3P56703 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.37■■□□□ 1.01
WNT3P56703 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.37■■□□□ 1.01
WNT3P56703 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.37■■□□□ 1.01
WNT3P56703 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
WNT3P56703 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.37■■□□□ 1.01
WNT3P56703 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.37■■□□□ 1.01
WNT3P56703 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.37■■□□□ 1.01
WNT3P56703 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
WNT3P56703 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
WNT3P56703 AC233723.2-201ENST00000623798 2106 ntBASIC21.37■■□□□ 1.01
WNT3P56703 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
WNT3P56703 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
WNT3P56703 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
WNT3P56703 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
WNT3P56703 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
WNT3P56703 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.36■■□□□ 1.01
WNT3P56703 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
WNT3P56703 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
WNT3P56703 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
WNT3P56703 AL117328.2-201ENST00000624617 1940 ntBASIC21.35■■□□□ 1.01
WNT3P56703 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
WNT3P56703 AC079630.1-202ENST00000618127 1840 ntBASIC21.35■■□□□ 1.01
WNT3P56703 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
WNT3P56703 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.35■■□□□ 1.01
WNT3P56703 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
WNT3P56703 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms