Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 DUX4L19-201ENST00000557448 1267 ntBASIC22.16■■□□□ 1.14
CLCNKAP51800 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.16■■□□□ 1.14
CLCNKAP51800 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.16■■□□□ 1.14
CLCNKAP51800 ABCB10P4-201ENST00000566803 2184 ntBASIC22.16■■□□□ 1.14
CLCNKAP51800 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
CLCNKAP51800 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CLCNKAP51800 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.16■■□□□ 1.14
CLCNKAP51800 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.16■■□□□ 1.14
CLCNKAP51800 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CLCNKAP51800 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
CLCNKAP51800 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CLCNKAP51800 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.15■■□□□ 1.14
CLCNKAP51800 AC133561.4-201ENST00000566112 224 ntBASIC22.15■■□□□ 1.14
CLCNKAP51800 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
CLCNKAP51800 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CLCNKAP51800 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
CLCNKAP51800 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CLCNKAP51800 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CLCNKAP51800 AC241377.3-202ENST00000626088 1088 ntBASIC22.14■■□□□ 1.13
CLCNKAP51800 AC241585.3-202ENST00000628937 1088 ntBASIC22.14■■□□□ 1.13
CLCNKAP51800 AC245100.8-202ENST00000629247 1058 ntBASIC22.14■■□□□ 1.13
CLCNKAP51800 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.14■■□□□ 1.13
CLCNKAP51800 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
CLCNKAP51800 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CLCNKAP51800 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CLCNKAP51800 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CLCNKAP51800 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CLCNKAP51800 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CLCNKAP51800 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.13■■□□□ 1.13
CLCNKAP51800 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CLCNKAP51800 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.13■■□□□ 1.13
CLCNKAP51800 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.13■■□□□ 1.13
CLCNKAP51800 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.13■■□□□ 1.13
CLCNKAP51800 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.13■■□□□ 1.13
CLCNKAP51800 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CLCNKAP51800 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CLCNKAP51800 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CLCNKAP51800 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.12■■□□□ 1.13
CLCNKAP51800 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.12■■□□□ 1.13
CLCNKAP51800 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CLCNKAP51800 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CLCNKAP51800 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CLCNKAP51800 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CLCNKAP51800 MIR638-201ENST00000385237 100 ntBASIC22.12■■□□□ 1.13
CLCNKAP51800 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CLCNKAP51800 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.12■■□□□ 1.13
CLCNKAP51800 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CLCNKAP51800 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CLCNKAP51800 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CLCNKAP51800 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CLCNKAP51800 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CLCNKAP51800 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.11■■□□□ 1.13
CLCNKAP51800 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CLCNKAP51800 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CLCNKAP51800 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
CLCNKAP51800 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CLCNKAP51800 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CLCNKAP51800 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CLCNKAP51800 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CLCNKAP51800 UNC93B3-201ENST00000308076 687 ntBASIC22.1■■□□□ 1.13
CLCNKAP51800 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CLCNKAP51800 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
CLCNKAP51800 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.1■■□□□ 1.13
CLCNKAP51800 AC106739.1-201ENST00000617035 715 ntBASIC22.1■■□□□ 1.13
CLCNKAP51800 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CLCNKAP51800 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
CLCNKAP51800 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CLCNKAP51800 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.09■■□□□ 1.13
CLCNKAP51800 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CLCNKAP51800 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
CLCNKAP51800 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CLCNKAP51800 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CLCNKAP51800 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.09■■□□□ 1.13
CLCNKAP51800 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CLCNKAP51800 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CLCNKAP51800 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.08■■□□□ 1.13
CLCNKAP51800 AC099791.2-201ENST00000605725 427 ntBASIC22.08■■□□□ 1.13
CLCNKAP51800 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.08■■□□□ 1.13
CLCNKAP51800 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CLCNKAP51800 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CLCNKAP51800 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CLCNKAP51800 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CLCNKAP51800 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
CLCNKAP51800 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
CLCNKAP51800 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CLCNKAP51800 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CLCNKAP51800 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.07■■□□□ 1.12
CLCNKAP51800 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.07■■□□□ 1.12
CLCNKAP51800 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CLCNKAP51800 AL138724.1-201ENST00000606771 1088 ntBASIC22.07■■□□□ 1.12
CLCNKAP51800 AL136162.1-201ENST00000607711 1078 ntBASIC22.07■■□□□ 1.12
CLCNKAP51800 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.07■■□□□ 1.12
CLCNKAP51800 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CLCNKAP51800 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
CLCNKAP51800 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CLCNKAP51800 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
CLCNKAP51800 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CLCNKAP51800 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
CLCNKAP51800 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CLCNKAP51800 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms