Protein–RNA interactions for Protein: P49954

NIT3, Omega-amidase NIT3, yeast

Predictions only

Length 291 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
NIT3	P49954	YPR153W	YPR153W	423 nt		5.41	□□□□□ -1.54
NIT3	P49954	snR32	snR32	188 nt		5.41	□□□□□ -1.54
NIT3	P49954	HOF1	YMR032W	2010 nt		5.41	□□□□□ -1.54
NIT3	P49954	VPS5	YOR069W	2028 nt		5.41	□□□□□ -1.54
NIT3	P49954	MPH2	YDL247W	1830 nt		5.41	□□□□□ -1.54
NIT3	P49954	ACS2	YLR153C	2052 nt		5.41	□□□□□ -1.54
NIT3	P49954	CCZ1	YBR131W	2115 nt		5.41	□□□□□ -1.54
NIT3	P49954	YDL109C	YDL109C	1944 nt		5.4	□□□□□ -1.54
NIT3	P49954	NHA1	YLR138W	2958 nt		5.4	□□□□□ -1.54
NIT3	P49954	SER3	YER081W	1410 nt		5.4	□□□□□ -1.54
NIT3	P49954	YLR108C	YLR108C	1458 nt		5.4	□□□□□ -1.54
NIT3	P49954	PGK1	YCR012W	1251 nt		5.4	□□□□□ -1.54
NIT3	P49954	GPM2	YDL021W	936 nt		5.4	□□□□□ -1.54
NIT3	P49954	KIN28	YDL108W	921 nt		5.4	□□□□□ -1.54
NIT3	P49954	YHL018W	YHL018W	363 nt		5.4	□□□□□ -1.54
NIT3	P49954	VMA16	YHR026W	642 nt		5.4	□□□□□ -1.54
NIT3	P49954	DAL2	YIR029W	1032 nt		5.4	□□□□□ -1.54
NIT3	P49954	GTT1	YIR038C	705 nt		5.4	□□□□□ -1.54
NIT3	P49954	CTK2	YJL006C	972 nt		5.4	□□□□□ -1.54
NIT3	P49954	RFC2	YJR068W	1062 nt		5.4	□□□□□ -1.54
NIT3	P49954	YLR296W	YLR296W	327 nt		5.4	□□□□□ -1.54
NIT3	P49954	FYV6	YNL133C	522 nt		5.4	□□□□□ -1.54
NIT3	P49954	ATP20	YPR020W	348 nt		5.4	□□□□□ -1.54
NIT3	P49954	EXG1	YLR300W	1347 nt		5.4	□□□□□ -1.55
NIT3	P49954	YCK1	YHR135C	1617 nt		5.4	□□□□□ -1.55
NIT3	P49954	PWP1	YLR196W	1731 nt		5.4	□□□□□ -1.55
NIT3	P49954	BUD14	YAR014C	2130 nt		5.39	□□□□□ -1.55
NIT3	P49954	TOS4	YLR183C	1470 nt		5.39	□□□□□ -1.55
NIT3	P49954	RRN3	YKL125W	1884 nt		5.39	□□□□□ -1.55
NIT3	P49954	TNA1	YGR260W	1605 nt		5.39	□□□□□ -1.55
NIT3	P49954	ATP6	Q0085	780 nt		5.39	□□□□□ -1.55
NIT3	P49954	YFR057W	YFR057W	456 nt		5.39	□□□□□ -1.55
NIT3	P49954	VAM7	YGL212W	951 nt		5.39	□□□□□ -1.55
NIT3	P49954	YGR079W	YGR079W	1113 nt		5.39	□□□□□ -1.55
NIT3	P49954	LNP1	YHR192W	837 nt		5.39	□□□□□ -1.55
NIT3	P49954	IRC25	YLR021W	540 nt		5.39	□□□□□ -1.55
NIT3	P49954	CYC2	YOR037W	1101 nt		5.39	□□□□□ -1.55
NIT3	P49954	PLP2	YOR281C	861 nt		5.39	□□□□□ -1.55
NIT3	P49954	SPP381	YBR152W	876 nt		5.39	□□□□□ -1.55
NIT3	P49954	LDH1	YBR204C	1128 nt		5.39	□□□□□ -1.55
NIT3	P49954	MOT2	YER068W	1764 nt		5.39	□□□□□ -1.55
NIT3	P49954	CNE1	YAL058W	1509 nt		5.38	□□□□□ -1.55
NIT3	P49954	ART10	YLR392C	1557 nt		5.38	□□□□□ -1.55
NIT3	P49954	PMT5	YDL093W	2232 nt		5.38	□□□□□ -1.55
NIT3	P49954	RAD55	YDR076W	1221 nt		5.38	□□□□□ -1.55
NIT3	P49954	YGL230C	YGL230C	444 nt		5.38	□□□□□ -1.55
NIT3	P49954	YGR111W	YGR111W	1203 nt		5.38	□□□□□ -1.55
NIT3	P49954	BTN2	YGR142W	1233 nt		5.38	□□□□□ -1.55
NIT3	P49954	HTD2	YHR067W	843 nt		5.38	□□□□□ -1.55
NIT3	P49954	YHR213W-A	YHR213W-A	234 nt		5.38	□□□□□ -1.55
NIT3	P49954	MRS1	YIR021W	1092 nt		5.38	□□□□□ -1.55
NIT3	P49954	PSF2	YJL072C	642 nt		5.38	□□□□□ -1.55
NIT3	P49954	YBL068W-A	YBL068W-A	237 nt		5.38	□□□□□ -1.55
NIT3	P49954	CAF40	YNL288W	1122 nt		5.38	□□□□□ -1.55
NIT3	P49954	PDX3	YBR035C	687 nt		5.38	□□□□□ -1.55
NIT3	P49954	RRP15	YPR143W	753 nt		5.38	□□□□□ -1.55
NIT3	P49954	APM2	YHL019C	1818 nt		5.38	□□□□□ -1.55
NIT3	P49954	SSU1	YPL092W	1377 nt		5.38	□□□□□ -1.55
NIT3	P49954	PUT1	YLR142W	1431 nt		5.38	□□□□□ -1.55
NIT3	P49954	VAN1	YML115C	1608 nt		5.37	□□□□□ -1.55
NIT3	P49954	SEO1	YAL067C	1782 nt		5.37	□□□□□ -1.55
NIT3	P49954	MDH3	YDL078C	1032 nt		5.37	□□□□□ -1.55
NIT3	P49954	YDL124W	YDL124W	939 nt		5.37	□□□□□ -1.55
NIT3	P49954	AIR2	YDL175C	1035 nt		5.37	□□□□□ -1.55
NIT3	P49954	STE2	YFL026W	1296 nt		5.37	□□□□□ -1.55
NIT3	P49954	SEH1	YGL100W	1050 nt		5.37	□□□□□ -1.55
NIT3	P49954	YAL069W	YAL069W	315 nt		5.37	□□□□□ -1.55
NIT3	P49954	SMD2	YLR275W	333 nt		5.37	□□□□□ -1.55
NIT3	P49954	YMR119W-A	YMR119W-A	375 nt		5.37	□□□□□ -1.55
NIT3	P49954	YNR025C	YNR025C	360 nt		5.37	□□□□□ -1.55
NIT3	P49954	YNR040W	YNR040W	771 nt		5.37	□□□□□ -1.55
NIT3	P49954	YNR061C	YNR061C	660 nt		5.37	□□□□□ -1.55
NIT3	P49954	VPS21	YOR089C	633 nt		5.37	□□□□□ -1.55
NIT3	P49954	DIA3	YDL024C	1407 nt		5.37	□□□□□ -1.55
NIT3	P49954	MDM38	YOL027C	1722 nt		5.37	□□□□□ -1.55
NIT3	P49954	RGP1	YDR137W	1992 nt		5.36	□□□□□ -1.55
NIT3	P49954	PYC1	YGL062W	3537 nt		5.36	□□□□□ -1.55
NIT3	P49954	MAK31	YCR020C-A	267 nt		5.36	□□□□□ -1.55
NIT3	P49954	YDR015C	YDR015C	240 nt		5.36	□□□□□ -1.55
NIT3	P49954	DCV1	YFR012W	609 nt		5.36	□□□□□ -1.55
NIT3	P49954	SOL3	YHR163W	750 nt		5.36	□□□□□ -1.55
NIT3	P49954	BOS1	YLR078C	735 nt		5.36	□□□□□ -1.55
NIT3	P49954	YLR157W-E	YLR157W-E	165 nt		5.36	□□□□□ -1.55
NIT3	P49954	RIF2	YLR453C	1188 nt		5.36	□□□□□ -1.55
NIT3	P49954	CCS1	YMR038C	750 nt		5.36	□□□□□ -1.55
NIT3	P49954	YNL097W-A	YNL097W-A	156 nt		5.36	□□□□□ -1.55
NIT3	P49954	YOR114W	YOR114W	885 nt		5.36	□□□□□ -1.55
NIT3	P49954	ENV9	YOR246C	993 nt		5.36	□□□□□ -1.55
NIT3	P49954	VMA4	YOR332W	702 nt		5.36	□□□□□ -1.55
NIT3	P49954	RMI1	YPL024W	726 nt		5.36	□□□□□ -1.55
NIT3	P49954	VMA13	YPR036W	1437 nt		5.36	□□□□□ -1.55
NIT3	P49954	GUD1	YDL238C	1470 nt		5.36	□□□□□ -1.55
NIT3	P49954	STR2	YJR130C	1920 nt		5.36	□□□□□ -1.55
NIT3	P49954	NTH2	YBR001C	2343 nt		5.36	□□□□□ -1.55
NIT3	P49954	ELP2	YGR200C	2367 nt		5.36	□□□□□ -1.55
NIT3	P49954	TEP1	YNL128W	1305 nt		5.35	□□□□□ -1.55
NIT3	P49954	YET3	YDL072C	612 nt		5.35	□□□□□ -1.55
NIT3	P49954	SCM3	YDL139C	672 nt		5.35	□□□□□ -1.55
NIT3	P49954	YDR042C	YDR042C	603 nt		5.35	□□□□□ -1.55
NIT3	P49954	YJL193W	YJL193W	1209 nt		5.35	□□□□□ -1.55

Retrieved 100 of 7,029 protein–RNA pairs in 21.7 ms