Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 YOR318CYOR318C 306 nt6.36□□□□□ -1.39
MSH4P40965 NOB1YOR056C 1380 nt6.35□□□□□ -1.39
MSH4P40965 EBP2YKL172W 1284 nt6.35□□□□□ -1.39
MSH4P40965 YBL062WYBL062W 381 nt6.35□□□□□ -1.39
MSH4P40965 SFG1YOR315W 1041 nt6.35□□□□□ -1.39
MSH4P40965 RBD2YPL246C 789 nt6.35□□□□□ -1.39
MSH4P40965 ATG1YGL180W 2694 nt6.35□□□□□ -1.39
MSH4P40965 PRP19YLL036C 1512 nt6.35□□□□□ -1.39
MSH4P40965 IBA57YJR122W 1494 nt6.34□□□□□ -1.39
MSH4P40965 ENT2YLR206W 1842 nt6.34□□□□□ -1.39
MSH4P40965 TFG1YGR186W 2208 nt6.34□□□□□ -1.39
MSH4P40965 ECM18YDR125C 1362 nt6.34□□□□□ -1.39
MSH4P40965 YDL183CYDL183C 963 nt6.34□□□□□ -1.39
MSH4P40965 HEM3YDL205C 984 nt6.34□□□□□ -1.39
MSH4P40965 RRP45YDR280W 918 nt6.34□□□□□ -1.39
MSH4P40965 DCV1YFR012W 609 nt6.34□□□□□ -1.39
MSH4P40965 YFR052C-AYFR052C-A 306 nt6.34□□□□□ -1.39
MSH4P40965 PGA3YML125C 939 nt6.34□□□□□ -1.39
MSH4P40965 RPL3YOR063W 1164 nt6.34□□□□□ -1.39
MSH4P40965 YOR342CYOR342C 960 nt6.34□□□□□ -1.39
MSH4P40965 CAM1YPL048W 1248 nt6.34□□□□□ -1.39
MSH4P40965 GRX5YPL059W 453 nt6.34□□□□□ -1.39
MSH4P40965 DBF4YDR052C 2115 nt6.34□□□□□ -1.4
MSH4P40965 YIL067CYIL067C 2037 nt6.33□□□□□ -1.4
MSH4P40965 UBP7YIL156W 3216 nt6.33□□□□□ -1.4
MSH4P40965 EIS1YMR031C 2532 nt6.33□□□□□ -1.4
MSH4P40965 CLA4YNL298W 2529 nt6.33□□□□□ -1.4
MSH4P40965 SLS1YLR139C 1932 nt6.33□□□□□ -1.4
MSH4P40965 snR63snR63 255 nt6.33□□□□□ -1.4
MSH4P40965 AIM6YDL237W 1173 nt6.33□□□□□ -1.4
MSH4P40965 CAF16YFL028C 870 nt6.33□□□□□ -1.4
MSH4P40965 VAM7YGL212W 951 nt6.33□□□□□ -1.4
MSH4P40965 ROT1YMR200W 771 nt6.33□□□□□ -1.4
MSH4P40965 SAM4YPL273W 978 nt6.33□□□□□ -1.4
MSH4P40965 LDB17YDL146W 1476 nt6.33□□□□□ -1.4
MSH4P40965 YHL012WYHL012W 1482 nt6.33□□□□□ -1.4
MSH4P40965 MEK1YOR351C 1494 nt6.33□□□□□ -1.4
MSH4P40965 SAD1YFR005C 1347 nt6.32□□□□□ -1.4
MSH4P40965 HOF1YMR032W 2010 nt6.32□□□□□ -1.4
MSH4P40965 NDC1YML031W 1968 nt6.32□□□□□ -1.4
MSH4P40965 YFH7YFR007W 1062 nt6.32□□□□□ -1.4
MSH4P40965 GTT1YIR038C 705 nt6.32□□□□□ -1.4
MSH4P40965 SDS22YKL193C 1017 nt6.32□□□□□ -1.4
MSH4P40965 NTR2YKR022C 969 nt6.32□□□□□ -1.4
MSH4P40965 YKR051WYKR051W 1257 nt6.32□□□□□ -1.4
MSH4P40965 PFA3YNL326C 1011 nt6.32□□□□□ -1.4
MSH4P40965 TAF3YPL011C 1062 nt6.32□□□□□ -1.4
MSH4P40965 CBC2YPL178W 627 nt6.32□□□□□ -1.4
MSH4P40965 STL1YDR536W 1710 nt6.32□□□□□ -1.4
MSH4P40965 SHE10YGL228W 1734 nt6.32□□□□□ -1.4
MSH4P40965 GYP1YOR070C 1914 nt6.32□□□□□ -1.4
MSH4P40965 MAK11YKL021C 1407 nt6.32□□□□□ -1.4
MSH4P40965 BUD14YAR014C 2130 nt6.31□□□□□ -1.4
MSH4P40965 TRK2YKR050W 2670 nt6.31□□□□□ -1.4
MSH4P40965 UBP9YER098W 2265 nt6.31□□□□□ -1.4
MSH4P40965 ACS2YLR153C 2052 nt6.31□□□□□ -1.4
MSH4P40965 SIP5YMR140W 1470 nt6.31□□□□□ -1.4
MSH4P40965 VCX1YDL128W 1236 nt6.31□□□□□ -1.4
MSH4P40965 YFR045WYFR045W 930 nt6.31□□□□□ -1.4
MSH4P40965 RPB4YJL140W 666 nt6.31□□□□□ -1.4
MSH4P40965 PAU17YLL025W 375 nt6.31□□□□□ -1.4
MSH4P40965 SNO1YMR095C 675 nt6.31□□□□□ -1.4
MSH4P40965 RFM1YOR279C 933 nt6.31□□□□□ -1.4
MSH4P40965 snR19snR19 568 nt6.31□□□□□ -1.4
MSH4P40965 snR3snR3 194 nt6.31□□□□□ -1.4
MSH4P40965 UBP8YMR223W 1416 nt6.31□□□□□ -1.4
MSH4P40965 CTS2YDR371W 1536 nt6.3□□□□□ -1.4
MSH4P40965 YDR282CYDR282C 1245 nt6.3□□□□□ -1.4
MSH4P40965 YIL028WYIL028W 399 nt6.3□□□□□ -1.4
MSH4P40965 YIL047C-AYIL047C-A 369 nt6.3□□□□□ -1.4
MSH4P40965 DID4YKL002W 699 nt6.3□□□□□ -1.4
MSH4P40965 RPC25YKL144C 639 nt6.3□□□□□ -1.4
MSH4P40965 PRM9YAR031W 897 nt6.3□□□□□ -1.4
MSH4P40965 RPS31YLR167W 459 nt6.3□□□□□ -1.4
MSH4P40965 ATP14YLR295C 375 nt6.3□□□□□ -1.4
MSH4P40965 RPS15YOL040C 429 nt6.3□□□□□ -1.4
MSH4P40965 ANT1YPR128C 987 nt6.3□□□□□ -1.4
MSH4P40965 MTC1YJL123C 1437 nt6.3□□□□□ -1.4
MSH4P40965 PWP1YLR196W 1731 nt6.3□□□□□ -1.4
MSH4P40965 OCA5YHL029C 2040 nt6.3□□□□□ -1.4
MSH4P40965 CBP1YJL209W 1965 nt6.29□□□□□ -1.4
MSH4P40965 DEG1YFL001W 1329 nt6.29□□□□□ -1.4
MSH4P40965 YMD8YML038C 1329 nt6.29□□□□□ -1.4
MSH4P40965 PTC1YDL006W 846 nt6.29□□□□□ -1.4
MSH4P40965 IDP1YDL066W 1287 nt6.29□□□□□ -1.4
MSH4P40965 YDR445CYDR445C 408 nt6.29□□□□□ -1.4
MSH4P40965 YGR204C-AYGR204C-A 114 nt6.29□□□□□ -1.4
MSH4P40965 SCW4YGR279C 1161 nt6.29□□□□□ -1.4
MSH4P40965 tX(XXX)DtX(XXX)D 100 nt6.29□□□□□ -1.4
MSH4P40965 IRC25YLR021W 540 nt6.29□□□□□ -1.4
MSH4P40965 SPS18YNL204C 903 nt6.29□□□□□ -1.4
MSH4P40965 MED8YBR193C 672 nt6.29□□□□□ -1.4
MSH4P40965 MET3YJR010W 1536 nt6.29□□□□□ -1.4
MSH4P40965 CEG1YGL130W 1380 nt6.29□□□□□ -1.4
MSH4P40965 TEF1YPR080W 1377 nt6.29□□□□□ -1.4
MSH4P40965 TEF2YBR118W 1377 nt6.29□□□□□ -1.4
MSH4P40965 YNL095CYNL095C 1929 nt6.29□□□□□ -1.4
MSH4P40965 MMP1YLL061W 1752 nt6.29□□□□□ -1.4
MSH4P40965 TGL1YKL140W 1647 nt6.28□□□□□ -1.4
MSH4P40965 MCX1YBR227C 1563 nt6.28□□□□□ -1.4
Retrieved 100 of 7,029 protein–RNA pairs in 18.8 ms