Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.51■□□□□ 0.71
CCL1P22362 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCL1P22362 AC079630.1-202ENST00000618127 1840 ntBASIC19.51■□□□□ 0.71
CCL1P22362 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCL1P22362 AC233723.2-201ENST00000623798 2106 ntBASIC19.51■□□□□ 0.71
CCL1P22362 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCL1P22362 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCL1P22362 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.51■□□□□ 0.71
CCL1P22362 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCL1P22362 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.51■□□□□ 0.71
CCL1P22362 AC103834.1-201ENST00000520383 144 ntBASIC19.51■□□□□ 0.71
CCL1P22362 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.51■□□□□ 0.71
CCL1P22362 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.51■□□□□ 0.71
CCL1P22362 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.51■□□□□ 0.71
CCL1P22362 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.51■□□□□ 0.71
CCL1P22362 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.51■□□□□ 0.71
CCL1P22362 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCL1P22362 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCL1P22362 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCL1P22362 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCL1P22362 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCL1P22362 C1orf229-201ENST00000623686 2258 ntBASIC19.5■□□□□ 0.71
CCL1P22362 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CCL1P22362 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCL1P22362 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.5■□□□□ 0.71
CCL1P22362 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCL1P22362 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCL1P22362 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCL1P22362 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCL1P22362 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCL1P22362 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCL1P22362 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.49■□□□□ 0.71
CCL1P22362 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CCL1P22362 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCL1P22362 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCL1P22362 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCL1P22362 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCL1P22362 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.49■□□□□ 0.71
CCL1P22362 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCL1P22362 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCL1P22362 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCL1P22362 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCL1P22362 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCL1P22362 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCL1P22362 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCL1P22362 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCL1P22362 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCL1P22362 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CCL1P22362 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCL1P22362 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCL1P22362 SNX5-217ENST00000606557 1087 ntBASIC19.48■□□□□ 0.71
CCL1P22362 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CCL1P22362 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCL1P22362 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCL1P22362 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCL1P22362 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
CCL1P22362 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCL1P22362 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCL1P22362 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCL1P22362 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCL1P22362 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.47■□□□□ 0.71
CCL1P22362 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCL1P22362 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCL1P22362 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.47■□□□□ 0.71
CCL1P22362 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCL1P22362 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCL1P22362 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
CCL1P22362 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CCL1P22362 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.47■□□□□ 0.71
CCL1P22362 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
CCL1P22362 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCL1P22362 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.46■□□□□ 0.71
CCL1P22362 AC103724.3-201ENST00000564481 992 ntBASIC19.46■□□□□ 0.71
CCL1P22362 AL033527.3-201ENST00000566366 1196 ntBASIC19.46■□□□□ 0.71
CCL1P22362 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCL1P22362 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCL1P22362 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCL1P22362 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.46■□□□□ 0.71
CCL1P22362 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCL1P22362 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCL1P22362 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CCL1P22362 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCL1P22362 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CCL1P22362 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CCL1P22362 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCL1P22362 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CCL1P22362 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCL1P22362 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCL1P22362 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.45■□□□□ 0.7
CCL1P22362 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCL1P22362 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCL1P22362 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCL1P22362 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCL1P22362 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCL1P22362 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CCL1P22362 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CCL1P22362 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCL1P22362 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CCL1P22362 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCL1P22362 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms