Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRKCAP17252 ABCB10P4-201ENST00000566803 2184 ntBASIC20.77■□□□□ 0.92
PRKCAP17252 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PRKCAP17252 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.77■□□□□ 0.92
PRKCAP17252 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRKCAP17252 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRKCAP17252 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.76■□□□□ 0.91
PRKCAP17252 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRKCAP17252 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PRKCAP17252 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRKCAP17252 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.76■□□□□ 0.91
PRKCAP17252 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.76■□□□□ 0.91
PRKCAP17252 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRKCAP17252 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.76■□□□□ 0.91
PRKCAP17252 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.76■□□□□ 0.91
PRKCAP17252 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRKCAP17252 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.76■□□□□ 0.91
PRKCAP17252 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRKCAP17252 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PRKCAP17252 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PRKCAP17252 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PRKCAP17252 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRKCAP17252 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PRKCAP17252 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PRKCAP17252 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.75■□□□□ 0.91
PRKCAP17252 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.75■□□□□ 0.91
PRKCAP17252 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.75■□□□□ 0.91
PRKCAP17252 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.75■□□□□ 0.91
PRKCAP17252 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRKCAP17252 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRKCAP17252 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRKCAP17252 ALDH1A3-203ENST00000557963 1670 ntBASIC20.74■□□□□ 0.91
PRKCAP17252 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRKCAP17252 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PRKCAP17252 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.74■□□□□ 0.91
PRKCAP17252 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
PRKCAP17252 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.74■□□□□ 0.91
PRKCAP17252 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.74■□□□□ 0.91
PRKCAP17252 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PRKCAP17252 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
PRKCAP17252 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.74■□□□□ 0.91
PRKCAP17252 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRKCAP17252 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.74■□□□□ 0.91
PRKCAP17252 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRKCAP17252 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PRKCAP17252 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PRKCAP17252 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PRKCAP17252 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PRKCAP17252 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.73■□□□□ 0.91
PRKCAP17252 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PRKCAP17252 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRKCAP17252 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.73■□□□□ 0.91
PRKCAP17252 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PRKCAP17252 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRKCAP17252 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRKCAP17252 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.73■□□□□ 0.91
PRKCAP17252 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRKCAP17252 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRKCAP17252 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRKCAP17252 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRKCAP17252 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRKCAP17252 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.72■□□□□ 0.91
PRKCAP17252 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRKCAP17252 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.72■□□□□ 0.91
PRKCAP17252 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRKCAP17252 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRKCAP17252 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PRKCAP17252 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRKCAP17252 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
PRKCAP17252 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.72■□□□□ 0.91
PRKCAP17252 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.72■□□□□ 0.91
PRKCAP17252 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRKCAP17252 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRKCAP17252 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
PRKCAP17252 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PRKCAP17252 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PRKCAP17252 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PRKCAP17252 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRKCAP17252 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.71■□□□□ 0.91
PRKCAP17252 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.71■□□□□ 0.91
PRKCAP17252 MIR6722-201ENST00000617286 78 ntBASIC20.71■□□□□ 0.91
PRKCAP17252 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.71■□□□□ 0.91
PRKCAP17252 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PRKCAP17252 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.71■□□□□ 0.91
PRKCAP17252 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PRKCAP17252 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRKCAP17252 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
PRKCAP17252 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRKCAP17252 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRKCAP17252 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PRKCAP17252 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRKCAP17252 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRKCAP17252 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRKCAP17252 GUSBP5-201ENST00000418136 578 ntBASIC20.7■□□□□ 0.9
PRKCAP17252 TSPY9P-201ENST00000440215 945 ntBASIC20.7■□□□□ 0.9
PRKCAP17252 TSPY11P-201ENST00000442607 1045 ntBASIC20.7■□□□□ 0.9
PRKCAP17252 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRKCAP17252 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRKCAP17252 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.69■□□□□ 0.9
PRKCAP17252 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms