Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
SNRPA1P09661 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC29.07■■■□□ 2.24
SNRPA1P09661 AC233992.3-201ENST00000607491 485 ntBASIC29.07■■■□□ 2.24
SNRPA1P09661 pRNA.6-201ENST00000610482 90 ntBASIC29.07■■■□□ 2.24
SNRPA1P09661 pRNA.5-201ENST00000612139 90 ntBASIC29.07■■■□□ 2.24
SNRPA1P09661 pRNA.11-201ENST00000618423 90 ntBASIC29.07■■■□□ 2.24
SNRPA1P09661 pRNA.13-201ENST00000619112 90 ntBASIC29.07■■■□□ 2.24
SNRPA1P09661 AC141586.4-201ENST00000624558 1573 ntBASIC29.07■■■□□ 2.24
SNRPA1P09661 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC29.07■■■□□ 2.24
SNRPA1P09661 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC29.06■■■□□ 2.24
SNRPA1P09661 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
SNRPA1P09661 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
SNRPA1P09661 BX842568.3-201ENST00000418104 571 ntBASIC29.06■■■□□ 2.24
SNRPA1P09661 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC29.06■■■□□ 2.24
SNRPA1P09661 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
SNRPA1P09661 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC29.06■■■□□ 2.24
SNRPA1P09661 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC29.05■■■□□ 2.24
SNRPA1P09661 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC29.05■■■□□ 2.24
SNRPA1P09661 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
SNRPA1P09661 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC29.04■■■□□ 2.24
SNRPA1P09661 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC29.04■■■□□ 2.24
SNRPA1P09661 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
SNRPA1P09661 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
SNRPA1P09661 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC29.04■■■□□ 2.24
SNRPA1P09661 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC29.04■■■□□ 2.24
SNRPA1P09661 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC29.04■■■□□ 2.24
SNRPA1P09661 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
SNRPA1P09661 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC29.04■■■□□ 2.24
SNRPA1P09661 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC29.03■■■□□ 2.24
SNRPA1P09661 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC29.03■■■□□ 2.24
SNRPA1P09661 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
SNRPA1P09661 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC29.03■■■□□ 2.24
SNRPA1P09661 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
SNRPA1P09661 SNX3-202ENST00000349379 890 ntTSL 2 BASIC29.03■■■□□ 2.24
SNRPA1P09661 MPST-208ENST00000628507 698 ntTSL 5 BASIC29.03■■■□□ 2.24
SNRPA1P09661 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC29.03■■■□□ 2.24
SNRPA1P09661 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
SNRPA1P09661 SHF-207ENST00000560540 2062 ntTSL 5 BASIC29.03■■■□□ 2.24
SNRPA1P09661 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
SNRPA1P09661 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC29.02■■■□□ 2.24
SNRPA1P09661 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC29.02■■■□□ 2.24
SNRPA1P09661 ASB1-202ENST00000409297 878 ntTSL 5 BASIC29.02■■■□□ 2.24
SNRPA1P09661 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
SNRPA1P09661 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC29.02■■■□□ 2.24
SNRPA1P09661 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
SNRPA1P09661 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
SNRPA1P09661 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
SNRPA1P09661 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
SNRPA1P09661 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC29.01■■■□□ 2.23
SNRPA1P09661 IRS3P-201ENST00000223076 1006 ntBASIC29.01■■■□□ 2.23
SNRPA1P09661 MIR5787-201ENST00000611784 55 ntBASIC29.01■■■□□ 2.23
SNRPA1P09661 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC29.01■■■□□ 2.23
SNRPA1P09661 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
SNRPA1P09661 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC29■■■□□ 2.23
SNRPA1P09661 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC29■■■□□ 2.23
SNRPA1P09661 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC29■■■□□ 2.23
SNRPA1P09661 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC29■■■□□ 2.23
SNRPA1P09661 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC29■■■□□ 2.23
SNRPA1P09661 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC29■■■□□ 2.23
SNRPA1P09661 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC29■■■□□ 2.23
SNRPA1P09661 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC29■■■□□ 2.23
SNRPA1P09661 MIR6821-201ENST00000617625 74 ntBASIC29■■■□□ 2.23
SNRPA1P09661 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC29■■■□□ 2.23
SNRPA1P09661 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC29■■■□□ 2.23
SNRPA1P09661 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC28.99■■■□□ 2.23
SNRPA1P09661 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC28.99■■■□□ 2.23
SNRPA1P09661 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
SNRPA1P09661 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
SNRPA1P09661 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
SNRPA1P09661 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
SNRPA1P09661 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
SNRPA1P09661 EI24-213ENST00000618552 1747 ntTSL 5 BASIC28.98■■■□□ 2.23
SNRPA1P09661 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC28.98■■■□□ 2.23
SNRPA1P09661 RHOF-204ENST00000537265 699 ntTSL 2 BASIC28.98■■■□□ 2.23
SNRPA1P09661 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC28.98■■■□□ 2.23
SNRPA1P09661 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC28.98■■■□□ 2.23
SNRPA1P09661 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC28.98■■■□□ 2.23
SNRPA1P09661 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
SNRPA1P09661 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
SNRPA1P09661 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
SNRPA1P09661 AC097381.1-201ENST00000429019 1296 ntBASIC28.97■■■□□ 2.23
SNRPA1P09661 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
SNRPA1P09661 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC28.97■■■□□ 2.23
SNRPA1P09661 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
SNRPA1P09661 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
SNRPA1P09661 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
SNRPA1P09661 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC28.96■■■□□ 2.23
SNRPA1P09661 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC28.95■■■□□ 2.23
SNRPA1P09661 EED-207ENST00000528180 1745 ntTSL 5 BASIC28.95■■■□□ 2.23
SNRPA1P09661 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
SNRPA1P09661 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC28.95■■■□□ 2.22
SNRPA1P09661 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC28.95■■■□□ 2.22
SNRPA1P09661 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC28.95■■■□□ 2.22
SNRPA1P09661 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC28.95■■■□□ 2.22
SNRPA1P09661 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
SNRPA1P09661 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC28.95■■■□□ 2.22
SNRPA1P09661 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
SNRPA1P09661 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
SNRPA1P09661 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC28.94■■■□□ 2.22
SNRPA1P09661 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms