Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.62■□□□□ 0.89
HTR1AP08908 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HTR1AP08908 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
HTR1AP08908 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.61■□□□□ 0.89
HTR1AP08908 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HTR1AP08908 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HTR1AP08908 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HTR1AP08908 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.61■□□□□ 0.89
HTR1AP08908 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.61■□□□□ 0.89
HTR1AP08908 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HTR1AP08908 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HTR1AP08908 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HTR1AP08908 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HTR1AP08908 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.61■□□□□ 0.89
HTR1AP08908 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.61■□□□□ 0.89
HTR1AP08908 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HTR1AP08908 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HTR1AP08908 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.6■□□□□ 0.89
HTR1AP08908 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.6■□□□□ 0.89
HTR1AP08908 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HTR1AP08908 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
HTR1AP08908 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
HTR1AP08908 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HTR1AP08908 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HTR1AP08908 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HTR1AP08908 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HTR1AP08908 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HTR1AP08908 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HTR1AP08908 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HTR1AP08908 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HTR1AP08908 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HTR1AP08908 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HTR1AP08908 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.6■□□□□ 0.89
HTR1AP08908 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HTR1AP08908 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HTR1AP08908 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.6■□□□□ 0.89
HTR1AP08908 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
HTR1AP08908 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HTR1AP08908 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.59■□□□□ 0.89
HTR1AP08908 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
HTR1AP08908 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
HTR1AP08908 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
HTR1AP08908 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HTR1AP08908 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HTR1AP08908 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
HTR1AP08908 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HTR1AP08908 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HTR1AP08908 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HTR1AP08908 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.58■□□□□ 0.89
HTR1AP08908 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
HTR1AP08908 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
HTR1AP08908 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.57■□□□□ 0.88
HTR1AP08908 RP9P-202ENST00000450133 1212 ntBASIC20.57■□□□□ 0.88
HTR1AP08908 AC092296.2-201ENST00000589470 999 ntBASIC20.57■□□□□ 0.88
HTR1AP08908 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.57■□□□□ 0.88
HTR1AP08908 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
HTR1AP08908 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
HTR1AP08908 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HTR1AP08908 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTR1AP08908 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTR1AP08908 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTR1AP08908 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTR1AP08908 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
HTR1AP08908 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.56■□□□□ 0.88
HTR1AP08908 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
HTR1AP08908 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HTR1AP08908 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HTR1AP08908 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HTR1AP08908 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HTR1AP08908 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HTR1AP08908 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.55■□□□□ 0.88
HTR1AP08908 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.55■□□□□ 0.88
HTR1AP08908 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HTR1AP08908 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HTR1AP08908 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.54■□□□□ 0.88
HTR1AP08908 ECEL1P2-201ENST00000461596 1295 ntBASIC20.54■□□□□ 0.88
HTR1AP08908 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HTR1AP08908 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
HTR1AP08908 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HTR1AP08908 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HTR1AP08908 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HTR1AP08908 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HTR1AP08908 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HTR1AP08908 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HTR1AP08908 AC139530.1-201ENST00000575312 1977 ntBASIC20.54■□□□□ 0.88
HTR1AP08908 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTR1AP08908 ESRRAP2-201ENST00000418437 1549 ntBASIC20.53■□□□□ 0.88
HTR1AP08908 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTR1AP08908 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HTR1AP08908 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.53■□□□□ 0.88
HTR1AP08908 AC093536.1-201ENST00000569153 554 ntBASIC20.53■□□□□ 0.88
HTR1AP08908 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.53■□□□□ 0.88
HTR1AP08908 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
HTR1AP08908 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
HTR1AP08908 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HTR1AP08908 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HTR1AP08908 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HTR1AP08908 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
HTR1AP08908 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
HTR1AP08908 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms