Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
COL4A2P08572 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.14■■□□□ 1.3
COL4A2P08572 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
COL4A2P08572 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL4A2P08572 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL4A2P08572 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL4A2P08572 MIR572-201ENST00000384983 95 ntBASIC23.13■■□□□ 1.29
COL4A2P08572 AL137784.2-201ENST00000607332 1000 ntBASIC23.13■■□□□ 1.29
COL4A2P08572 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL4A2P08572 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.13■■□□□ 1.29
COL4A2P08572 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
COL4A2P08572 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
COL4A2P08572 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL4A2P08572 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL4A2P08572 AC123595.1-201ENST00000440769 1046 ntBASIC23.13■■□□□ 1.29
COL4A2P08572 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC23.13■■□□□ 1.29
COL4A2P08572 AL358852.1-201ENST00000623174 1268 ntBASIC23.13■■□□□ 1.29
COL4A2P08572 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.12■■□□□ 1.29
COL4A2P08572 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.12■■□□□ 1.29
COL4A2P08572 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC23.12■■□□□ 1.29
COL4A2P08572 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
COL4A2P08572 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL4A2P08572 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.12■■□□□ 1.29
COL4A2P08572 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.12■■□□□ 1.29
COL4A2P08572 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.12■■□□□ 1.29
COL4A2P08572 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL4A2P08572 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.11■■□□□ 1.29
COL4A2P08572 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC23.11■■□□□ 1.29
COL4A2P08572 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
COL4A2P08572 AC010525.1-201ENST00000585559 441 ntBASIC23.11■■□□□ 1.29
COL4A2P08572 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL4A2P08572 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
COL4A2P08572 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL4A2P08572 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL4A2P08572 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL4A2P08572 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.11■■□□□ 1.29
COL4A2P08572 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.11■■□□□ 1.29
COL4A2P08572 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.11■■□□□ 1.29
COL4A2P08572 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
COL4A2P08572 MIR6084-201ENST00000622012 110 ntBASIC23.11■■□□□ 1.29
COL4A2P08572 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
COL4A2P08572 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL4A2P08572 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
COL4A2P08572 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL4A2P08572 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
COL4A2P08572 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL4A2P08572 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
COL4A2P08572 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
COL4A2P08572 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
COL4A2P08572 CCDC92B-201ENST00000575506 885 ntBASIC23.1■■□□□ 1.29
COL4A2P08572 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL4A2P08572 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
COL4A2P08572 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.1■■□□□ 1.29
COL4A2P08572 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.09■■□□□ 1.29
COL4A2P08572 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
COL4A2P08572 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
COL4A2P08572 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.09■■□□□ 1.29
COL4A2P08572 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
COL4A2P08572 KRT18P14-201ENST00000534205 1250 ntBASIC23.09■■□□□ 1.29
COL4A2P08572 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.09■■□□□ 1.29
COL4A2P08572 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
COL4A2P08572 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
COL4A2P08572 ALDH1A3-203ENST00000557963 1670 ntBASIC23.09■■□□□ 1.29
COL4A2P08572 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL4A2P08572 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
COL4A2P08572 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL4A2P08572 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL4A2P08572 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL4A2P08572 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL4A2P08572 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.08■■□□□ 1.29
COL4A2P08572 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.08■■□□□ 1.29
COL4A2P08572 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.08■■□□□ 1.29
COL4A2P08572 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
COL4A2P08572 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
COL4A2P08572 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.08■■□□□ 1.29
COL4A2P08572 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.08■■□□□ 1.29
COL4A2P08572 HLA-L-211ENST00000482052 1765 ntBASIC23.08■■□□□ 1.29
COL4A2P08572 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
COL4A2P08572 AC141586.4-201ENST00000624558 1573 ntBASIC23.08■■□□□ 1.28
COL4A2P08572 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
COL4A2P08572 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
COL4A2P08572 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
COL4A2P08572 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC23.08■■□□□ 1.28
COL4A2P08572 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.08■■□□□ 1.28
COL4A2P08572 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.28
COL4A2P08572 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
COL4A2P08572 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.07■■□□□ 1.28
COL4A2P08572 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.07■■□□□ 1.28
COL4A2P08572 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
COL4A2P08572 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
COL4A2P08572 TERF1P2-201ENST00000583350 1212 ntBASIC23.07■■□□□ 1.28
COL4A2P08572 AL354811.1-201ENST00000610286 706 ntBASIC23.07■■□□□ 1.28
COL4A2P08572 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.07■■□□□ 1.28
COL4A2P08572 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.07■■□□□ 1.28
COL4A2P08572 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.06■■□□□ 1.28
COL4A2P08572 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC23.06■■□□□ 1.28
COL4A2P08572 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
COL4A2P08572 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
COL4A2P08572 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL4A2P08572 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms