Protein–RNA interactions for Protein: P08047

SP1, Transcription factor Sp1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP1P08047 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.6■□□□□ 0.89
SP1P08047 AC027682.1-201ENST00000562846 899 ntBASIC20.6■□□□□ 0.89
SP1P08047 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.6■□□□□ 0.89
SP1P08047 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.6■□□□□ 0.89
SP1P08047 CA15P2-201ENST00000611168 834 ntBASIC20.6■□□□□ 0.89
SP1P08047 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SP1P08047 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SP1P08047 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
SP1P08047 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SP1P08047 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.59■□□□□ 0.89
SP1P08047 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.59■□□□□ 0.89
SP1P08047 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SP1P08047 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SP1P08047 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SP1P08047 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.59■□□□□ 0.89
SP1P08047 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SP1P08047 AC008764.7-201ENST00000593779 1081 ntBASIC20.59■□□□□ 0.89
SP1P08047 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SP1P08047 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SP1P08047 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.59■□□□□ 0.89
SP1P08047 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SP1P08047 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SP1P08047 AC141586.4-201ENST00000624558 1573 ntBASIC20.59■□□□□ 0.89
SP1P08047 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SP1P08047 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SP1P08047 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SP1P08047 AC020928.2-201ENST00000588717 2197 ntBASIC20.58■□□□□ 0.89
SP1P08047 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SP1P08047 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SP1P08047 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SP1P08047 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SP1P08047 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SP1P08047 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SP1P08047 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.58■□□□□ 0.88
SP1P08047 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SP1P08047 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SP1P08047 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
SP1P08047 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SP1P08047 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SP1P08047 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SP1P08047 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SP1P08047 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.57■□□□□ 0.88
SP1P08047 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SP1P08047 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SP1P08047 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SP1P08047 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.57■□□□□ 0.88
SP1P08047 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SP1P08047 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.57■□□□□ 0.88
SP1P08047 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SP1P08047 pRNA.6-201ENST00000610482 90 ntBASIC20.57■□□□□ 0.88
SP1P08047 pRNA.5-201ENST00000612139 90 ntBASIC20.57■□□□□ 0.88
SP1P08047 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
SP1P08047 pRNA.11-201ENST00000618423 90 ntBASIC20.57■□□□□ 0.88
SP1P08047 pRNA.13-201ENST00000619112 90 ntBASIC20.57■□□□□ 0.88
SP1P08047 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SP1P08047 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SP1P08047 AC099791.1-201ENST00000416440 715 ntBASIC20.56■□□□□ 0.88
SP1P08047 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.56■□□□□ 0.88
SP1P08047 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SP1P08047 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SP1P08047 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SP1P08047 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.55■□□□□ 0.88
SP1P08047 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SP1P08047 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SP1P08047 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SP1P08047 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.55■□□□□ 0.88
SP1P08047 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SP1P08047 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.55■□□□□ 0.88
SP1P08047 RARRES2P6-201ENST00000567333 442 ntBASIC20.55■□□□□ 0.88
SP1P08047 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.55■□□□□ 0.88
SP1P08047 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.55■□□□□ 0.88
SP1P08047 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.55■□□□□ 0.88
SP1P08047 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SP1P08047 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SP1P08047 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SP1P08047 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
SP1P08047 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.54■□□□□ 0.88
SP1P08047 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.54■□□□□ 0.88
SP1P08047 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SP1P08047 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.54■□□□□ 0.88
SP1P08047 AC233992.3-201ENST00000607491 485 ntBASIC20.54■□□□□ 0.88
SP1P08047 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.54■□□□□ 0.88
SP1P08047 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
SP1P08047 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SP1P08047 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.53■□□□□ 0.88
SP1P08047 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.53■□□□□ 0.88
SP1P08047 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SP1P08047 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.53■□□□□ 0.88
SP1P08047 BX842568.3-201ENST00000418104 571 ntBASIC20.53■□□□□ 0.88
SP1P08047 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SP1P08047 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.53■□□□□ 0.88
SP1P08047 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.53■□□□□ 0.88
SP1P08047 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SP1P08047 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SP1P08047 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SP1P08047 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SP1P08047 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SP1P08047 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SP1P08047 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SP1P08047 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms