Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TCRAP04437 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC17.19■□□□□ 0.34
TCRAP04437 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TCRAP04437 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
TCRAP04437 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRAP04437 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TCRAP04437 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRAP04437 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TCRAP04437 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRAP04437 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TCRAP04437 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRAP04437 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TCRAP04437 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRAP04437 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRAP04437 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TCRAP04437 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TCRAP04437 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRAP04437 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.18■□□□□ 0.34
TCRAP04437 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRAP04437 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.17■□□□□ 0.34
TCRAP04437 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.17■□□□□ 0.34
TCRAP04437 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.17■□□□□ 0.34
TCRAP04437 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TCRAP04437 AL592295.1-201ENST00000400984 884 ntBASIC17.17■□□□□ 0.34
TCRAP04437 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TCRAP04437 HES4-202ENST00000428771 1040 ntTSL 2 BASIC17.17■□□□□ 0.34
TCRAP04437 RPS2P7-201ENST00000447334 885 ntBASIC17.17■□□□□ 0.34
TCRAP04437 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TCRAP04437 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.17■□□□□ 0.34
TCRAP04437 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TCRAP04437 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TCRAP04437 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TCRAP04437 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.17■□□□□ 0.34
TCRAP04437 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TCRAP04437 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC17.16■□□□□ 0.34
TCRAP04437 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TCRAP04437 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.16■□□□□ 0.34
TCRAP04437 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TCRAP04437 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TCRAP04437 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC17.16■□□□□ 0.34
TCRAP04437 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.16■□□□□ 0.34
TCRAP04437 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.16■□□□□ 0.34
TCRAP04437 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TCRAP04437 AC242852.2-201ENST00000615738 1807 ntBASIC17.16■□□□□ 0.34
TCRAP04437 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.16■□□□□ 0.34
TCRAP04437 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TCRAP04437 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRAP04437 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRAP04437 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRAP04437 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRAP04437 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TCRAP04437 MIR639-201ENST00000384974 98 ntBASIC17.15■□□□□ 0.34
TCRAP04437 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TCRAP04437 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TCRAP04437 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TCRAP04437 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.15■□□□□ 0.34
TCRAP04437 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TCRAP04437 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.15■□□□□ 0.34
TCRAP04437 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRAP04437 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRAP04437 ESRRAP2-201ENST00000418437 1549 ntBASIC17.15■□□□□ 0.34
TCRAP04437 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TCRAP04437 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRAP04437 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCRAP04437 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC17.14■□□□□ 0.33
TCRAP04437 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCRAP04437 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TCRAP04437 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TCRAP04437 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCRAP04437 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCRAP04437 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCRAP04437 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TCRAP04437 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TCRAP04437 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCRAP04437 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TCRAP04437 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
TCRAP04437 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC17.13■□□□□ 0.33
TCRAP04437 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.13■□□□□ 0.33
TCRAP04437 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TCRAP04437 EI24-204ENST00000527235 1625 ntTSL 5 BASIC17.13■□□□□ 0.33
TCRAP04437 ALDH1A3-203ENST00000557963 1670 ntBASIC17.13■□□□□ 0.33
TCRAP04437 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCRAP04437 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TCRAP04437 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRAP04437 AC009831.1-201ENST00000580420 1582 ntBASIC17.12■□□□□ 0.33
TCRAP04437 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.12■□□□□ 0.33
TCRAP04437 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.12■□□□□ 0.33
TCRAP04437 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC17.12■□□□□ 0.33
TCRAP04437 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRAP04437 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRAP04437 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRAP04437 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRAP04437 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
TCRAP04437 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TCRAP04437 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC17.11■□□□□ 0.33
TCRAP04437 AC133552.2-201ENST00000619106 1032 ntBASIC17.11■□□□□ 0.33
TCRAP04437 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TCRAP04437 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.1■□□□□ 0.33
TCRAP04437 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TCRAP04437 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms