Protein–RNA interactions for Protein: O95970

LGI1, Leucine-rich glioma-inactivated protein 1, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1O95970 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LGI1O95970 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LGI1O95970 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LGI1O95970 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.87■□□□□ 0.93
LGI1O95970 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.87■□□□□ 0.93
LGI1O95970 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LGI1O95970 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
LGI1O95970 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LGI1O95970 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
LGI1O95970 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LGI1O95970 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LGI1O95970 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.87■□□□□ 0.93
LGI1O95970 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
LGI1O95970 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
LGI1O95970 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.86■□□□□ 0.93
LGI1O95970 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.86■□□□□ 0.93
LGI1O95970 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
LGI1O95970 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LGI1O95970 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LGI1O95970 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LGI1O95970 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LGI1O95970 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.85■□□□□ 0.93
LGI1O95970 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LGI1O95970 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LGI1O95970 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LGI1O95970 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.85■□□□□ 0.93
LGI1O95970 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.85■□□□□ 0.93
LGI1O95970 AC004448.1-201ENST00000458332 883 ntBASIC20.85■□□□□ 0.93
LGI1O95970 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.85■□□□□ 0.93
LGI1O95970 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
LGI1O95970 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LGI1O95970 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LGI1O95970 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.85■□□□□ 0.93
LGI1O95970 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
LGI1O95970 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LGI1O95970 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
LGI1O95970 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LGI1O95970 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.84■□□□□ 0.93
LGI1O95970 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
LGI1O95970 KRT8P33-201ENST00000508125 1423 ntBASIC20.84■□□□□ 0.93
LGI1O95970 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LGI1O95970 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LGI1O95970 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.84■□□□□ 0.93
LGI1O95970 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LGI1O95970 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LGI1O95970 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LGI1O95970 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
LGI1O95970 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LGI1O95970 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LGI1O95970 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LGI1O95970 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.83■□□□□ 0.93
LGI1O95970 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.83■□□□□ 0.93
LGI1O95970 MIR4508-201ENST00000584178 70 ntBASIC20.83■□□□□ 0.93
LGI1O95970 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.83■□□□□ 0.93
LGI1O95970 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
LGI1O95970 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.83■□□□□ 0.92
LGI1O95970 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.83■□□□□ 0.92
LGI1O95970 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
LGI1O95970 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LGI1O95970 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LGI1O95970 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LGI1O95970 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LGI1O95970 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LGI1O95970 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
LGI1O95970 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.82■□□□□ 0.92
LGI1O95970 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LGI1O95970 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.82■□□□□ 0.92
LGI1O95970 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LGI1O95970 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.82■□□□□ 0.92
LGI1O95970 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LGI1O95970 AL117328.2-201ENST00000624617 1940 ntBASIC20.82■□□□□ 0.92
LGI1O95970 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.81■□□□□ 0.92
LGI1O95970 C1orf229-201ENST00000623686 2258 ntBASIC20.81■□□□□ 0.92
LGI1O95970 AC233723.2-201ENST00000623798 2106 ntBASIC20.81■□□□□ 0.92
LGI1O95970 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LGI1O95970 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LGI1O95970 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LGI1O95970 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
LGI1O95970 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
LGI1O95970 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.81■□□□□ 0.92
LGI1O95970 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.81■□□□□ 0.92
LGI1O95970 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LGI1O95970 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LGI1O95970 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.81■□□□□ 0.92
LGI1O95970 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LGI1O95970 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.8■□□□□ 0.92
LGI1O95970 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.8■□□□□ 0.92
LGI1O95970 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
LGI1O95970 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LGI1O95970 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LGI1O95970 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.8■□□□□ 0.92
LGI1O95970 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
LGI1O95970 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
LGI1O95970 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LGI1O95970 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
LGI1O95970 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
LGI1O95970 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LGI1O95970 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LGI1O95970 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
LGI1O95970 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms