Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NKX2-2O95096 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
NKX2-2O95096 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
NKX2-2O95096 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NKX2-2O95096 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.92■□□□□ 0.94
NKX2-2O95096 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
NKX2-2O95096 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.92■□□□□ 0.94
NKX2-2O95096 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NKX2-2O95096 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
NKX2-2O95096 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NKX2-2O95096 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NKX2-2O95096 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NKX2-2O95096 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NKX2-2O95096 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NKX2-2O95096 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NKX2-2O95096 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NKX2-2O95096 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.91■□□□□ 0.94
NKX2-2O95096 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NKX2-2O95096 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.91■□□□□ 0.94
NKX2-2O95096 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.91■□□□□ 0.94
NKX2-2O95096 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
NKX2-2O95096 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.91■□□□□ 0.94
NKX2-2O95096 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.91■□□□□ 0.94
NKX2-2O95096 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
NKX2-2O95096 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NKX2-2O95096 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
NKX2-2O95096 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NKX2-2O95096 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.9■□□□□ 0.94
NKX2-2O95096 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.9■□□□□ 0.94
NKX2-2O95096 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NKX2-2O95096 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.9■□□□□ 0.94
NKX2-2O95096 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.9■□□□□ 0.94
NKX2-2O95096 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.9■□□□□ 0.94
NKX2-2O95096 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.9■□□□□ 0.94
NKX2-2O95096 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
NKX2-2O95096 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NKX2-2O95096 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NKX2-2O95096 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NKX2-2O95096 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
NKX2-2O95096 GUSBP5-201ENST00000418136 578 ntBASIC20.89■□□□□ 0.93
NKX2-2O95096 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
NKX2-2O95096 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.89■□□□□ 0.93
NKX2-2O95096 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.89■□□□□ 0.93
NKX2-2O95096 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.89■□□□□ 0.93
NKX2-2O95096 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NKX2-2O95096 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NKX2-2O95096 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NKX2-2O95096 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.88■□□□□ 0.93
NKX2-2O95096 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NKX2-2O95096 AC079630.1-202ENST00000618127 1840 ntBASIC20.88■□□□□ 0.93
NKX2-2O95096 DUSP8P3-201ENST00000399571 1760 ntBASIC20.88■□□□□ 0.93
NKX2-2O95096 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NKX2-2O95096 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.88■□□□□ 0.93
NKX2-2O95096 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NKX2-2O95096 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
NKX2-2O95096 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.88■□□□□ 0.93
NKX2-2O95096 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.88■□□□□ 0.93
NKX2-2O95096 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
NKX2-2O95096 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
NKX2-2O95096 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NKX2-2O95096 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
NKX2-2O95096 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NKX2-2O95096 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NKX2-2O95096 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
NKX2-2O95096 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NKX2-2O95096 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NKX2-2O95096 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
NKX2-2O95096 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.87■□□□□ 0.93
NKX2-2O95096 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NKX2-2O95096 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.86■□□□□ 0.93
NKX2-2O95096 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NKX2-2O95096 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NKX2-2O95096 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.86■□□□□ 0.93
NKX2-2O95096 MIR6724-1-201ENST00000616420 92 ntBASIC20.86■□□□□ 0.93
NKX2-2O95096 MIR6724-2-201ENST00000616483 92 ntBASIC20.86■□□□□ 0.93
NKX2-2O95096 MIR6724-4-201ENST00000617390 92 ntBASIC20.86■□□□□ 0.93
NKX2-2O95096 MIR6724-3-201ENST00000622482 92 ntBASIC20.86■□□□□ 0.93
NKX2-2O95096 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NKX2-2O95096 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NKX2-2O95096 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
NKX2-2O95096 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NKX2-2O95096 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.85■□□□□ 0.93
NKX2-2O95096 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NKX2-2O95096 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NKX2-2O95096 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
NKX2-2O95096 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NKX2-2O95096 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
NKX2-2O95096 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NKX2-2O95096 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
NKX2-2O95096 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NKX2-2O95096 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
NKX2-2O95096 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.85■□□□□ 0.93
NKX2-2O95096 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.84■□□□□ 0.93
NKX2-2O95096 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NKX2-2O95096 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NKX2-2O95096 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.84■□□□□ 0.93
NKX2-2O95096 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NKX2-2O95096 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NKX2-2O95096 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NKX2-2O95096 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms