Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC35.68■■■■□ 3.3
PCF11O94913 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC35.68■■■■□ 3.3
PCF11O94913 SLC47A1P1-202ENST00000449666 945 ntBASIC35.68■■■■□ 3.3
PCF11O94913 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC35.68■■■■□ 3.3
PCF11O94913 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC35.68■■■■□ 3.3
PCF11O94913 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
PCF11O94913 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
PCF11O94913 MED17-227ENST00000640521 2047 ntTSL 5 BASIC35.68■■■■□ 3.3
PCF11O94913 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC35.67■■■■□ 3.3
PCF11O94913 AC142381.3-201ENST00000568208 1670 ntBASIC35.66■■■■□ 3.3
PCF11O94913 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC35.66■■■■□ 3.3
PCF11O94913 PLD4-205ENST00000553861 667 ntTSL 2 BASIC35.66■■■■□ 3.3
PCF11O94913 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
PCF11O94913 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC35.66■■■■□ 3.3
PCF11O94913 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC35.65■■■■□ 3.3
PCF11O94913 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC35.65■■■■□ 3.3
PCF11O94913 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC35.65■■■■□ 3.3
PCF11O94913 AC008764.7-201ENST00000593779 1081 ntBASIC35.65■■■■□ 3.3
PCF11O94913 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC35.64■■■■□ 3.3
PCF11O94913 ASB1-202ENST00000409297 878 ntTSL 5 BASIC35.64■■■■□ 3.3
PCF11O94913 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC35.64■■■■□ 3.3
PCF11O94913 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC35.64■■■■□ 3.3
PCF11O94913 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC35.64■■■■□ 3.3
PCF11O94913 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC35.63■■■■□ 3.29
PCF11O94913 SHF-207ENST00000560540 2062 ntTSL 5 BASIC35.63■■■■□ 3.29
PCF11O94913 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC35.63■■■■□ 3.29
PCF11O94913 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
PCF11O94913 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC35.63■■■■□ 3.29
PCF11O94913 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC35.62■■■■□ 3.29
PCF11O94913 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC35.62■■■■□ 3.29
PCF11O94913 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC35.62■■■■□ 3.29
PCF11O94913 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC35.62■■■■□ 3.29
PCF11O94913 TMEM202-AS1-202ENST00000565181 2325 ntBASIC35.62■■■■□ 3.29
PCF11O94913 AC135731.1-201ENST00000569415 2548 ntBASIC35.61■■■■□ 3.29
PCF11O94913 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC35.61■■■■□ 3.29
PCF11O94913 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC35.61■■■■□ 3.29
PCF11O94913 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC35.61■■■■□ 3.29
PCF11O94913 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC35.61■■■■□ 3.29
PCF11O94913 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC35.61■■■■□ 3.29
PCF11O94913 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC35.6■■■■□ 3.29
PCF11O94913 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
PCF11O94913 RHOF-204ENST00000537265 699 ntTSL 2 BASIC35.6■■■■□ 3.29
PCF11O94913 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC35.6■■■■□ 3.29
PCF11O94913 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC35.6■■■■□ 3.29
PCF11O94913 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC35.6■■■■□ 3.29
PCF11O94913 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC35.6■■■■□ 3.29
PCF11O94913 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
PCF11O94913 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC35.59■■■■□ 3.29
PCF11O94913 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
PCF11O94913 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
PCF11O94913 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC35.59■■■■□ 3.29
PCF11O94913 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC35.59■■■■□ 3.29
PCF11O94913 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC35.59■■■■□ 3.29
PCF11O94913 BX842568.3-201ENST00000418104 571 ntBASIC35.59■■■■□ 3.29
PCF11O94913 RBM38-205ENST00000440234 686 ntTSL 2 BASIC35.59■■■■□ 3.29
PCF11O94913 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
PCF11O94913 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
PCF11O94913 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
PCF11O94913 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
PCF11O94913 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
PCF11O94913 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
PCF11O94913 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC35.58■■■■□ 3.29
PCF11O94913 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC35.58■■■■□ 3.29
PCF11O94913 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.28
PCF11O94913 pRNA.6-201ENST00000610482 90 ntBASIC35.57■■■■□ 3.28
PCF11O94913 pRNA.5-201ENST00000612139 90 ntBASIC35.57■■■■□ 3.28
PCF11O94913 pRNA.11-201ENST00000618423 90 ntBASIC35.57■■■■□ 3.28
PCF11O94913 pRNA.13-201ENST00000619112 90 ntBASIC35.57■■■■□ 3.28
PCF11O94913 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC35.57■■■■□ 3.28
PCF11O94913 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.28
PCF11O94913 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC35.56■■■■□ 3.28
PCF11O94913 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC35.56■■■■□ 3.28
PCF11O94913 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC35.56■■■■□ 3.28
PCF11O94913 EI24-213ENST00000618552 1747 ntTSL 5 BASIC35.56■■■■□ 3.28
PCF11O94913 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
PCF11O94913 DENND3-207ENST00000518347 850 ntTSL 2 BASIC35.55■■■■□ 3.28
PCF11O94913 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC35.55■■■■□ 3.28
PCF11O94913 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC35.55■■■■□ 3.28
PCF11O94913 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC35.55■■■■□ 3.28
PCF11O94913 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
PCF11O94913 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC35.55■■■■□ 3.28
PCF11O94913 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC35.55■■■■□ 3.28
PCF11O94913 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
PCF11O94913 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC35.54■■■■□ 3.28
PCF11O94913 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC35.54■■■■□ 3.28
PCF11O94913 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
PCF11O94913 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
PCF11O94913 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC35.54■■■■□ 3.28
PCF11O94913 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
PCF11O94913 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC35.53■■■■□ 3.28
PCF11O94913 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC35.53■■■■□ 3.28
PCF11O94913 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
PCF11O94913 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC35.53■■■■□ 3.28
PCF11O94913 AC141586.4-201ENST00000624558 1573 ntBASIC35.53■■■■□ 3.28
PCF11O94913 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC35.52■■■■□ 3.28
PCF11O94913 AC233992.3-201ENST00000607491 485 ntBASIC35.52■■■■□ 3.28
PCF11O94913 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
PCF11O94913 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
PCF11O94913 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
PCF11O94913 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC35.52■■■■□ 3.28
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms