Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PFDN1O60925 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PFDN1O60925 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PFDN1O60925 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC20.3■□□□□ 0.84
PFDN1O60925 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PFDN1O60925 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PFDN1O60925 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
PFDN1O60925 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PFDN1O60925 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PFDN1O60925 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PFDN1O60925 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
PFDN1O60925 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PFDN1O60925 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.29■□□□□ 0.84
PFDN1O60925 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PFDN1O60925 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PFDN1O60925 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PFDN1O60925 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PFDN1O60925 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PFDN1O60925 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.29■□□□□ 0.84
PFDN1O60925 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PFDN1O60925 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PFDN1O60925 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PFDN1O60925 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.29■□□□□ 0.84
PFDN1O60925 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
PFDN1O60925 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PFDN1O60925 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
PFDN1O60925 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PFDN1O60925 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PFDN1O60925 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PFDN1O60925 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PFDN1O60925 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PFDN1O60925 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.28■□□□□ 0.84
PFDN1O60925 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PFDN1O60925 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PFDN1O60925 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PFDN1O60925 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PFDN1O60925 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.27■□□□□ 0.84
PFDN1O60925 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PFDN1O60925 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.27■□□□□ 0.84
PFDN1O60925 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.27■□□□□ 0.84
PFDN1O60925 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PFDN1O60925 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.27■□□□□ 0.84
PFDN1O60925 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PFDN1O60925 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PFDN1O60925 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PFDN1O60925 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PFDN1O60925 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PFDN1O60925 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
PFDN1O60925 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PFDN1O60925 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PFDN1O60925 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
PFDN1O60925 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PFDN1O60925 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PFDN1O60925 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PFDN1O60925 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PFDN1O60925 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PFDN1O60925 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
PFDN1O60925 WASH5P-204ENST00000632292 975 ntBASIC20.25■□□□□ 0.83
PFDN1O60925 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PFDN1O60925 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PFDN1O60925 AC242852.2-201ENST00000615738 1807 ntBASIC20.25■□□□□ 0.83
PFDN1O60925 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PFDN1O60925 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PFDN1O60925 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PFDN1O60925 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PFDN1O60925 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PFDN1O60925 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PFDN1O60925 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PFDN1O60925 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
PFDN1O60925 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PFDN1O60925 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PFDN1O60925 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.23■□□□□ 0.83
PFDN1O60925 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.23■□□□□ 0.83
PFDN1O60925 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PFDN1O60925 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PFDN1O60925 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PFDN1O60925 EBPL-203ENST00000378270 579 ntTSL 2 BASIC20.23■□□□□ 0.83
PFDN1O60925 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PFDN1O60925 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PFDN1O60925 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PFDN1O60925 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PFDN1O60925 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.23■□□□□ 0.83
PFDN1O60925 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PFDN1O60925 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PFDN1O60925 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
PFDN1O60925 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
PFDN1O60925 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.22■□□□□ 0.83
PFDN1O60925 FBXW4P1-201ENST00000426721 2239 ntBASIC20.22■□□□□ 0.83
PFDN1O60925 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
PFDN1O60925 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.22■□□□□ 0.83
PFDN1O60925 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PFDN1O60925 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PFDN1O60925 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PFDN1O60925 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PFDN1O60925 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PFDN1O60925 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PFDN1O60925 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.22■□□□□ 0.83
PFDN1O60925 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.21■□□□□ 0.83
PFDN1O60925 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
PFDN1O60925 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms