Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PEX1O43933 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PEX1O43933 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PEX1O43933 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PEX1O43933 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.86■■□□□ 1.09
PEX1O43933 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PEX1O43933 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PEX1O43933 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
PEX1O43933 ECEL1P1-201ENST00000373592 1742 ntBASIC21.86■■□□□ 1.09
PEX1O43933 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PEX1O43933 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PEX1O43933 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PEX1O43933 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PEX1O43933 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.85■■□□□ 1.09
PEX1O43933 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.85■■□□□ 1.09
PEX1O43933 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PEX1O43933 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PEX1O43933 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
PEX1O43933 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.84■■□□□ 1.09
PEX1O43933 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
PEX1O43933 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PEX1O43933 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
PEX1O43933 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.84■■□□□ 1.09
PEX1O43933 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PEX1O43933 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PEX1O43933 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
PEX1O43933 GUSBP5-202ENST00000510805 1989 ntBASIC21.83■■□□□ 1.09
PEX1O43933 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PEX1O43933 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PEX1O43933 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.83■■□□□ 1.09
PEX1O43933 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.83■■□□□ 1.09
PEX1O43933 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PEX1O43933 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PEX1O43933 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
PEX1O43933 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PEX1O43933 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
PEX1O43933 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PEX1O43933 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PEX1O43933 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PEX1O43933 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
PEX1O43933 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PEX1O43933 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PEX1O43933 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PEX1O43933 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
PEX1O43933 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PEX1O43933 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
PEX1O43933 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PEX1O43933 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PEX1O43933 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.82■■□□□ 1.08
PEX1O43933 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PEX1O43933 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.81■■□□□ 1.08
PEX1O43933 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PEX1O43933 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PEX1O43933 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.81■■□□□ 1.08
PEX1O43933 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PEX1O43933 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.81■■□□□ 1.08
PEX1O43933 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PEX1O43933 AC022616.5-201ENST00000518796 181 ntBASIC21.81■■□□□ 1.08
PEX1O43933 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PEX1O43933 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PEX1O43933 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PEX1O43933 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PEX1O43933 AC007375.3-201ENST00000600936 2314 ntBASIC21.8■■□□□ 1.08
PEX1O43933 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.8■■□□□ 1.08
PEX1O43933 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.8■■□□□ 1.08
PEX1O43933 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PEX1O43933 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PEX1O43933 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PEX1O43933 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PEX1O43933 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PEX1O43933 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
PEX1O43933 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.8■■□□□ 1.08
PEX1O43933 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PEX1O43933 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PEX1O43933 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.79■■□□□ 1.08
PEX1O43933 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PEX1O43933 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PEX1O43933 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PEX1O43933 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PEX1O43933 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PEX1O43933 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PEX1O43933 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PEX1O43933 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PEX1O43933 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PEX1O43933 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PEX1O43933 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.79■■□□□ 1.08
PEX1O43933 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PEX1O43933 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
PEX1O43933 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PEX1O43933 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.79■■□□□ 1.08
PEX1O43933 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PEX1O43933 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PEX1O43933 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
PEX1O43933 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
PEX1O43933 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PEX1O43933 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PEX1O43933 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PEX1O43933 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.78■■□□□ 1.08
PEX1O43933 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PEX1O43933 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms