Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRAF3IP2O43734 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.15■□□□□ 0.82
TRAF3IP2O43734 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAF3IP2O43734 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAF3IP2O43734 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TRAF3IP2O43734 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.14■□□□□ 0.82
TRAF3IP2O43734 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TRAF3IP2O43734 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRAF3IP2O43734 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.14■□□□□ 0.81
TRAF3IP2O43734 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TRAF3IP2O43734 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.14■□□□□ 0.81
TRAF3IP2O43734 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.14■□□□□ 0.81
TRAF3IP2O43734 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRAF3IP2O43734 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAF3IP2O43734 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAF3IP2O43734 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.13■□□□□ 0.81
TRAF3IP2O43734 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAF3IP2O43734 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAF3IP2O43734 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.13■□□□□ 0.81
TRAF3IP2O43734 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.13■□□□□ 0.81
TRAF3IP2O43734 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAF3IP2O43734 AC092068.2-201ENST00000590491 1708 ntBASIC20.13■□□□□ 0.81
TRAF3IP2O43734 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
TRAF3IP2O43734 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
TRAF3IP2O43734 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAF3IP2O43734 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.12■□□□□ 0.81
TRAF3IP2O43734 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAF3IP2O43734 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TRAF3IP2O43734 DUSP8P5-201ENST00000422884 1815 ntBASIC20.12■□□□□ 0.81
TRAF3IP2O43734 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TRAF3IP2O43734 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.12■□□□□ 0.81
TRAF3IP2O43734 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRAF3IP2O43734 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAF3IP2O43734 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAF3IP2O43734 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAF3IP2O43734 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAF3IP2O43734 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAF3IP2O43734 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAF3IP2O43734 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAF3IP2O43734 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAF3IP2O43734 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.11■□□□□ 0.81
TRAF3IP2O43734 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.11■□□□□ 0.81
TRAF3IP2O43734 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.11■□□□□ 0.81
TRAF3IP2O43734 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
TRAF3IP2O43734 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
TRAF3IP2O43734 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRAF3IP2O43734 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAF3IP2O43734 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.11■□□□□ 0.81
TRAF3IP2O43734 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAF3IP2O43734 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAF3IP2O43734 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAF3IP2O43734 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
TRAF3IP2O43734 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRAF3IP2O43734 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRAF3IP2O43734 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAF3IP2O43734 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAF3IP2O43734 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAF3IP2O43734 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.1■□□□□ 0.81
TRAF3IP2O43734 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAF3IP2O43734 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
TRAF3IP2O43734 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRAF3IP2O43734 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAF3IP2O43734 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAF3IP2O43734 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAF3IP2O43734 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TRAF3IP2O43734 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAF3IP2O43734 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TRAF3IP2O43734 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
TRAF3IP2O43734 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAF3IP2O43734 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.09■□□□□ 0.81
TRAF3IP2O43734 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
TRAF3IP2O43734 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.09■□□□□ 0.81
TRAF3IP2O43734 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAF3IP2O43734 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRAF3IP2O43734 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAF3IP2O43734 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.09■□□□□ 0.81
TRAF3IP2O43734 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAF3IP2O43734 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
TRAF3IP2O43734 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.08■□□□□ 0.81
TRAF3IP2O43734 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.08■□□□□ 0.81
TRAF3IP2O43734 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRAF3IP2O43734 KRT16P3-201ENST00000439127 1283 ntBASIC20.08■□□□□ 0.81
TRAF3IP2O43734 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.08■□□□□ 0.81
TRAF3IP2O43734 MIR6724-1-201ENST00000616420 92 ntBASIC20.08■□□□□ 0.81
TRAF3IP2O43734 MIR6724-2-201ENST00000616483 92 ntBASIC20.08■□□□□ 0.81
TRAF3IP2O43734 MIR6724-4-201ENST00000617390 92 ntBASIC20.08■□□□□ 0.81
TRAF3IP2O43734 MIR6724-3-201ENST00000622482 92 ntBASIC20.08■□□□□ 0.81
TRAF3IP2O43734 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.08■□□□□ 0.8
TRAF3IP2O43734 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRAF3IP2O43734 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAF3IP2O43734 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.07■□□□□ 0.8
TRAF3IP2O43734 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAF3IP2O43734 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRAF3IP2O43734 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAF3IP2O43734 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.07■□□□□ 0.8
TRAF3IP2O43734 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
TRAF3IP2O43734 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAF3IP2O43734 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRAF3IP2O43734 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.07■□□□□ 0.8
TRAF3IP2O43734 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms