Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC37.46■■■■□ 3.59
CHD1O14646 BID-214ENST00000617586 542 ntTSL 5 BASIC37.46■■■■□ 3.59
CHD1O14646 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC37.46■■■■□ 3.59
CHD1O14646 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC37.46■■■■□ 3.59
CHD1O14646 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC37.46■■■■□ 3.59
CHD1O14646 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC37.45■■■■□ 3.59
CHD1O14646 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC37.45■■■■□ 3.59
CHD1O14646 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC37.45■■■■□ 3.59
CHD1O14646 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC37.45■■■■□ 3.59
CHD1O14646 AC010525.1-201ENST00000585559 441 ntBASIC37.45■■■■□ 3.59
CHD1O14646 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC37.45■■■■□ 3.59
CHD1O14646 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC37.45■■■■□ 3.59
CHD1O14646 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC37.45■■■■□ 3.59
CHD1O14646 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC37.44■■■■□ 3.58
CHD1O14646 GALNS-213ENST00000569433 723 ntTSL 3 BASIC37.44■■■■□ 3.58
CHD1O14646 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC37.44■■■■□ 3.58
CHD1O14646 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC37.44■■■■□ 3.58
CHD1O14646 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC37.43■■■■□ 3.58
CHD1O14646 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC37.43■■■■□ 3.58
CHD1O14646 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC37.43■■■■□ 3.58
CHD1O14646 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC37.42■■■■□ 3.58
CHD1O14646 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC37.42■■■■□ 3.58
CHD1O14646 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC37.41■■■■□ 3.58
CHD1O14646 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC37.41■■■■□ 3.58
CHD1O14646 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC37.41■■■■□ 3.58
CHD1O14646 TPRG1LP1-201ENST00000598702 760 ntBASIC37.4■■■■□ 3.58
CHD1O14646 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC37.4■■■■□ 3.58
CHD1O14646 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC37.4■■■■□ 3.58
CHD1O14646 AC142086.2-201ENST00000569753 217 ntBASIC37.39■■■■□ 3.58
CHD1O14646 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC37.39■■■■□ 3.58
CHD1O14646 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC37.39■■■■□ 3.58
CHD1O14646 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC37.38■■■■□ 3.58
CHD1O14646 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC37.38■■■■□ 3.57
CHD1O14646 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC37.38■■■■□ 3.57
CHD1O14646 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC37.38■■■■□ 3.57
CHD1O14646 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC37.38■■■■□ 3.57
CHD1O14646 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC37.38■■■■□ 3.57
CHD1O14646 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC37.38■■■■□ 3.57
CHD1O14646 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC37.38■■■■□ 3.57
CHD1O14646 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC37.38■■■■□ 3.57
CHD1O14646 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC37.37■■■■□ 3.57
CHD1O14646 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC37.37■■■■□ 3.57
CHD1O14646 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC37.37■■■■□ 3.57
CHD1O14646 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC37.37■■■■□ 3.57
CHD1O14646 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC37.36■■■■□ 3.57
CHD1O14646 MPST-204ENST00000404393 1329 ntTSL 5 BASIC37.36■■■■□ 3.57
CHD1O14646 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC37.36■■■■□ 3.57
CHD1O14646 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC37.36■■■■□ 3.57
CHD1O14646 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC37.36■■■■□ 3.57
CHD1O14646 LHPP-203ENST00000392757 840 ntTSL 3 BASIC37.36■■■■□ 3.57
CHD1O14646 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC37.36■■■■□ 3.57
CHD1O14646 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC37.35■■■■□ 3.57
CHD1O14646 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC37.35■■■■□ 3.57
CHD1O14646 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC37.35■■■■□ 3.57
CHD1O14646 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC37.35■■■■□ 3.57
CHD1O14646 KRT18P6-201ENST00000555540 1265 ntBASIC37.35■■■■□ 3.57
CHD1O14646 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC37.35■■■■□ 3.57
CHD1O14646 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC37.35■■■■□ 3.57
CHD1O14646 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC37.34■■■■□ 3.57
CHD1O14646 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC37.34■■■■□ 3.57
CHD1O14646 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC37.34■■■■□ 3.57
CHD1O14646 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC37.34■■■■□ 3.57
CHD1O14646 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC37.33■■■■□ 3.57
CHD1O14646 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC37.33■■■■□ 3.57
CHD1O14646 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC37.33■■■■□ 3.57
CHD1O14646 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC37.33■■■■□ 3.57
CHD1O14646 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC37.33■■■■□ 3.57
CHD1O14646 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC37.32■■■■□ 3.57
CHD1O14646 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC37.32■■■■□ 3.56
CHD1O14646 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC37.32■■■■□ 3.56
CHD1O14646 DET1-205ENST00000558413 583 ntTSL 4 BASIC37.32■■■■□ 3.56
CHD1O14646 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC37.31■■■■□ 3.56
CHD1O14646 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC37.31■■■■□ 3.56
CHD1O14646 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC37.31■■■■□ 3.56
CHD1O14646 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC37.31■■■■□ 3.56
CHD1O14646 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC37.31■■■■□ 3.56
CHD1O14646 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC37.31■■■■□ 3.56
CHD1O14646 AL050303.2-201ENST00000619798 666 ntBASIC37.31■■■■□ 3.56
CHD1O14646 GUSBP6-202ENST00000438529 1198 ntBASIC37.3■■■■□ 3.56
CHD1O14646 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC37.3■■■■□ 3.56
CHD1O14646 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC37.3■■■■□ 3.56
CHD1O14646 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC37.3■■■■□ 3.56
CHD1O14646 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC37.29■■■■□ 3.56
CHD1O14646 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC37.29■■■■□ 3.56
CHD1O14646 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC37.29■■■■□ 3.56
CHD1O14646 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC37.29■■■■□ 3.56
CHD1O14646 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC37.29■■■■□ 3.56
CHD1O14646 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC37.29■■■■□ 3.56
CHD1O14646 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC37.29■■■■□ 3.56
CHD1O14646 AC091060.1-201ENST00000623524 1766 ntBASIC37.29■■■■□ 3.56
CHD1O14646 AC004854.2-201ENST00000608450 1441 ntBASIC37.29■■■■□ 3.56
CHD1O14646 USF2-207ENST00000595068 1612 ntTSL 5 BASIC37.28■■■■□ 3.56
CHD1O14646 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC37.28■■■■□ 3.56
CHD1O14646 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC37.28■■■■□ 3.56
CHD1O14646 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC37.28■■■■□ 3.56
CHD1O14646 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC37.28■■■■□ 3.56
CHD1O14646 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC37.28■■■■□ 3.56
CHD1O14646 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC37.28■■■■□ 3.56
CHD1O14646 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC37.28■■■■□ 3.56
CHD1O14646 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC37.28■■■■□ 3.56
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms