Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 GUSBP5-201ENST00000418136 578 ntBASIC21.55■■□□□ 1.04
RTCAO00442 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RTCAO00442 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
RTCAO00442 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RTCAO00442 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RTCAO00442 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RTCAO00442 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.54■■□□□ 1.04
RTCAO00442 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RTCAO00442 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTCAO00442 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTCAO00442 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTCAO00442 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTCAO00442 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.54■■□□□ 1.04
RTCAO00442 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.54■■□□□ 1.04
RTCAO00442 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
RTCAO00442 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RTCAO00442 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
RTCAO00442 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.53■■□□□ 1.04
RTCAO00442 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.53■■□□□ 1.04
RTCAO00442 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTCAO00442 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTCAO00442 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.53■■□□□ 1.04
RTCAO00442 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
RTCAO00442 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTCAO00442 AC005703.6-201ENST00000623265 1329 ntBASIC21.53■■□□□ 1.04
RTCAO00442 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTCAO00442 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
RTCAO00442 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTCAO00442 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTCAO00442 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.52■■□□□ 1.04
RTCAO00442 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
RTCAO00442 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.52■■□□□ 1.04
RTCAO00442 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RTCAO00442 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.52■■□□□ 1.03
RTCAO00442 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
RTCAO00442 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.51■■□□□ 1.03
RTCAO00442 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.51■■□□□ 1.03
RTCAO00442 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
RTCAO00442 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RTCAO00442 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RTCAO00442 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTCAO00442 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTCAO00442 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTCAO00442 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
RTCAO00442 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.51■■□□□ 1.03
RTCAO00442 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RTCAO00442 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTCAO00442 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
RTCAO00442 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTCAO00442 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.51■■□□□ 1.03
RTCAO00442 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.5■■□□□ 1.03
RTCAO00442 DUSP8P5-201ENST00000422884 1815 ntBASIC21.5■■□□□ 1.03
RTCAO00442 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
RTCAO00442 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
RTCAO00442 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RTCAO00442 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.5■■□□□ 1.03
RTCAO00442 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.5■■□□□ 1.03
RTCAO00442 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTCAO00442 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTCAO00442 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTCAO00442 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTCAO00442 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTCAO00442 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTCAO00442 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTCAO00442 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
RTCAO00442 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTCAO00442 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTCAO00442 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RTCAO00442 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
RTCAO00442 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.49■■□□□ 1.03
RTCAO00442 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTCAO00442 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTCAO00442 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTCAO00442 C9orf163-202ENST00000624034 2573 ntBASIC21.48■■□□□ 1.03
RTCAO00442 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTCAO00442 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RTCAO00442 KRT16P3-201ENST00000439127 1283 ntBASIC21.48■■□□□ 1.03
RTCAO00442 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RTCAO00442 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.48■■□□□ 1.03
RTCAO00442 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTCAO00442 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RTCAO00442 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RTCAO00442 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTCAO00442 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.48■■□□□ 1.03
RTCAO00442 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.48■■□□□ 1.03
RTCAO00442 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.47■■□□□ 1.03
RTCAO00442 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTCAO00442 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RTCAO00442 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.47■■□□□ 1.03
RTCAO00442 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.47■■□□□ 1.03
RTCAO00442 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTCAO00442 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
RTCAO00442 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTCAO00442 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTCAO00442 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTCAO00442 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTCAO00442 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTCAO00442 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
RTCAO00442 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTCAO00442 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms