Protein–RNA interactions for Protein: O00400

SLC33A1, Acetyl-coenzyme A transporter 1, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC33A1O00400 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.18■□□□□ 0.66
SLC33A1O00400 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC33A1O00400 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
SLC33A1O00400 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC33A1O00400 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC33A1O00400 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC33A1O00400 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.18■□□□□ 0.66
SLC33A1O00400 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC33A1O00400 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC33A1O00400 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC33A1O00400 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC33A1O00400 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SLC33A1O00400 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SLC33A1O00400 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC33A1O00400 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC33A1O00400 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.17■□□□□ 0.66
SLC33A1O00400 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.17■□□□□ 0.66
SLC33A1O00400 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.17■□□□□ 0.66
SLC33A1O00400 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC33A1O00400 AF131216.4-201ENST00000638924 1588 ntBASIC19.17■□□□□ 0.66
SLC33A1O00400 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SLC33A1O00400 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC33A1O00400 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.17■□□□□ 0.66
SLC33A1O00400 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC33A1O00400 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC33A1O00400 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC33A1O00400 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC33A1O00400 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC33A1O00400 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.16■□□□□ 0.66
SLC33A1O00400 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC33A1O00400 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC33A1O00400 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC33A1O00400 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC33A1O00400 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SLC33A1O00400 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC33A1O00400 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SLC33A1O00400 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SLC33A1O00400 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC33A1O00400 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SLC33A1O00400 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC33A1O00400 AC103834.1-201ENST00000520383 144 ntBASIC19.15■□□□□ 0.66
SLC33A1O00400 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.15■□□□□ 0.66
SLC33A1O00400 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC33A1O00400 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC33A1O00400 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC33A1O00400 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC33A1O00400 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC33A1O00400 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC33A1O00400 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLC33A1O00400 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC33A1O00400 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC33A1O00400 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC33A1O00400 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC33A1O00400 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
SLC33A1O00400 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.14■□□□□ 0.65
SLC33A1O00400 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.14■□□□□ 0.65
SLC33A1O00400 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC33A1O00400 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC33A1O00400 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.14■□□□□ 0.65
SLC33A1O00400 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
SLC33A1O00400 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC33A1O00400 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC33A1O00400 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC33A1O00400 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SLC33A1O00400 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
SLC33A1O00400 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC33A1O00400 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.13■□□□□ 0.65
SLC33A1O00400 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC33A1O00400 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SLC33A1O00400 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC33A1O00400 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC33A1O00400 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SLC33A1O00400 KRT8P33-201ENST00000508125 1423 ntBASIC19.13■□□□□ 0.65
SLC33A1O00400 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC33A1O00400 ALDH1A3-203ENST00000557963 1670 ntBASIC19.13■□□□□ 0.65
SLC33A1O00400 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC33A1O00400 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC33A1O00400 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC33A1O00400 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
SLC33A1O00400 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC33A1O00400 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SLC33A1O00400 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.12■□□□□ 0.65
SLC33A1O00400 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.12■□□□□ 0.65
SLC33A1O00400 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
SLC33A1O00400 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC33A1O00400 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SLC33A1O00400 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SLC33A1O00400 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SLC33A1O00400 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC33A1O00400 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SLC33A1O00400 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC33A1O00400 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SLC33A1O00400 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.12■□□□□ 0.65
SLC33A1O00400 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC33A1O00400 C9orf163-202ENST00000624034 2573 ntBASIC19.12■□□□□ 0.65
SLC33A1O00400 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC33A1O00400 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC33A1O00400 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC33A1O00400 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC33A1O00400 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms