Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TMEM256-PLSCR3K7ERE1 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 AC005559.1-201ENST00000589661 871 ntBASIC14.33□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC14.33□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC14.32□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC14.32□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC14.31□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC14.31□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC14.31□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC14.31□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC14.31□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC14.3□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC14.3□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC14.3□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC14.3□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC14.29□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC14.29□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC14.29□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC14.29□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC14.29□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC14.29□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC14.28□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC14.28□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC14.27□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC14.27□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms