Protein–RNA interactions for Protein: A2A288

ZC3H12D, Probable ribonuclease ZC3H12D, humanhuman

Known RBP Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H12DA2A288 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZC3H12DA2A288 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.61■□□□□ 0.89
ZC3H12DA2A288 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZC3H12DA2A288 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZC3H12DA2A288 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZC3H12DA2A288 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZC3H12DA2A288 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZC3H12DA2A288 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ZC3H12DA2A288 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H12DA2A288 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
ZC3H12DA2A288 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H12DA2A288 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H12DA2A288 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
ZC3H12DA2A288 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H12DA2A288 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ZC3H12DA2A288 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.6■□□□□ 0.89
ZC3H12DA2A288 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H12DA2A288 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ZC3H12DA2A288 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.6■□□□□ 0.89
ZC3H12DA2A288 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ZC3H12DA2A288 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H12DA2A288 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H12DA2A288 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H12DA2A288 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ZC3H12DA2A288 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.59■□□□□ 0.89
ZC3H12DA2A288 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H12DA2A288 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ZC3H12DA2A288 AC239859.2-201ENST00000444165 318 ntBASIC20.59■□□□□ 0.89
ZC3H12DA2A288 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.59■□□□□ 0.89
ZC3H12DA2A288 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H12DA2A288 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ZC3H12DA2A288 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.59■□□□□ 0.89
ZC3H12DA2A288 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZC3H12DA2A288 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
ZC3H12DA2A288 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.58■□□□□ 0.89
ZC3H12DA2A288 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.58■□□□□ 0.89
ZC3H12DA2A288 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ZC3H12DA2A288 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ZC3H12DA2A288 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.58■□□□□ 0.89
ZC3H12DA2A288 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZC3H12DA2A288 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
ZC3H12DA2A288 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZC3H12DA2A288 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.58■□□□□ 0.89
ZC3H12DA2A288 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ZC3H12DA2A288 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.58■□□□□ 0.89
ZC3H12DA2A288 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.58■□□□□ 0.89
ZC3H12DA2A288 Z92544.1-202ENST00000571933 1220 ntBASIC20.58■□□□□ 0.89
ZC3H12DA2A288 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.58■□□□□ 0.89
ZC3H12DA2A288 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.58■□□□□ 0.88
ZC3H12DA2A288 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ZC3H12DA2A288 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZC3H12DA2A288 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZC3H12DA2A288 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZC3H12DA2A288 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZC3H12DA2A288 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.57■□□□□ 0.88
ZC3H12DA2A288 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZC3H12DA2A288 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZC3H12DA2A288 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZC3H12DA2A288 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ZC3H12DA2A288 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.56■□□□□ 0.88
ZC3H12DA2A288 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZC3H12DA2A288 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
ZC3H12DA2A288 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
ZC3H12DA2A288 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZC3H12DA2A288 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZC3H12DA2A288 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.56■□□□□ 0.88
ZC3H12DA2A288 KRT125P-201ENST00000546827 989 ntBASIC20.56■□□□□ 0.88
ZC3H12DA2A288 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.56■□□□□ 0.88
ZC3H12DA2A288 MIR4787-201ENST00000607364 84 ntBASIC20.56■□□□□ 0.88
ZC3H12DA2A288 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ZC3H12DA2A288 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZC3H12DA2A288 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZC3H12DA2A288 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ZC3H12DA2A288 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZC3H12DA2A288 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
ZC3H12DA2A288 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
ZC3H12DA2A288 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZC3H12DA2A288 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZC3H12DA2A288 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZC3H12DA2A288 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZC3H12DA2A288 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZC3H12DA2A288 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZC3H12DA2A288 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZC3H12DA2A288 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
ZC3H12DA2A288 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZC3H12DA2A288 AC092028.1-203ENST00000608262 953 ntBASIC20.55■□□□□ 0.88
ZC3H12DA2A288 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.55■□□□□ 0.88
ZC3H12DA2A288 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.55■□□□□ 0.88
ZC3H12DA2A288 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZC3H12DA2A288 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZC3H12DA2A288 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.54■□□□□ 0.88
ZC3H12DA2A288 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZC3H12DA2A288 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZC3H12DA2A288 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZC3H12DA2A288 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.54■□□□□ 0.88
ZC3H12DA2A288 AL035685.1-201ENST00000636663 812 ntBASIC20.54■□□□□ 0.88
ZC3H12DA2A288 AC079834.2-201ENST00000609776 1949 ntBASIC20.54■□□□□ 0.88
ZC3H12DA2A288 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.54■□□□□ 0.88
ZC3H12DA2A288 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZC3H12DA2A288 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms