Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
CCDC189A1A4V9 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
CCDC189A1A4V9 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.48■■□□□ 1.19
CCDC189A1A4V9 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC189A1A4V9 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC189A1A4V9 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.48■■□□□ 1.19
CCDC189A1A4V9 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC189A1A4V9 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.47■■□□□ 1.19
CCDC189A1A4V9 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CCDC189A1A4V9 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.47■■□□□ 1.19
CCDC189A1A4V9 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.47■■□□□ 1.19
CCDC189A1A4V9 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC22.47■■□□□ 1.19
CCDC189A1A4V9 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC22.47■■□□□ 1.19
CCDC189A1A4V9 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCDC189A1A4V9 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.47■■□□□ 1.19
CCDC189A1A4V9 AL391422.3-201ENST00000603791 2761 ntBASIC22.47■■□□□ 1.19
CCDC189A1A4V9 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCDC189A1A4V9 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC189A1A4V9 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC189A1A4V9 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC189A1A4V9 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC189A1A4V9 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC22.46■■□□□ 1.19
CCDC189A1A4V9 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC189A1A4V9 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
CCDC189A1A4V9 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC189A1A4V9 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.46■■□□□ 1.19
CCDC189A1A4V9 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.46■■□□□ 1.19
CCDC189A1A4V9 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC189A1A4V9 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC189A1A4V9 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC189A1A4V9 AC092667.1-201ENST00000434301 2586 ntBASIC22.46■■□□□ 1.19
CCDC189A1A4V9 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC189A1A4V9 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
CCDC189A1A4V9 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC189A1A4V9 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
CCDC189A1A4V9 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
CCDC189A1A4V9 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC189A1A4V9 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC189A1A4V9 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.45■■□□□ 1.18
CCDC189A1A4V9 KRT18P24-201ENST00000344739 1156 ntBASIC22.45■■□□□ 1.18
CCDC189A1A4V9 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.45■■□□□ 1.18
CCDC189A1A4V9 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC22.45■■□□□ 1.18
CCDC189A1A4V9 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC22.45■■□□□ 1.18
CCDC189A1A4V9 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC189A1A4V9 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC189A1A4V9 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.45■■□□□ 1.18
CCDC189A1A4V9 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC189A1A4V9 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
CCDC189A1A4V9 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC189A1A4V9 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC189A1A4V9 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
CCDC189A1A4V9 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC22.44■■□□□ 1.18
CCDC189A1A4V9 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
CCDC189A1A4V9 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCDC189A1A4V9 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCDC189A1A4V9 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
CCDC189A1A4V9 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCDC189A1A4V9 AC131274.2-201ENST00000580697 1507 ntBASIC22.43■■□□□ 1.18
CCDC189A1A4V9 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
CCDC189A1A4V9 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
CCDC189A1A4V9 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.43■■□□□ 1.18
CCDC189A1A4V9 ATP5G2P3-201ENST00000429083 425 ntBASIC22.43■■□□□ 1.18
CCDC189A1A4V9 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.43■■□□□ 1.18
CCDC189A1A4V9 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCDC189A1A4V9 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCDC189A1A4V9 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CCDC189A1A4V9 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC189A1A4V9 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC189A1A4V9 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC189A1A4V9 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
CCDC189A1A4V9 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC189A1A4V9 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC189A1A4V9 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC189A1A4V9 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC189A1A4V9 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
CCDC189A1A4V9 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC189A1A4V9 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC189A1A4V9 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC189A1A4V9 DUX4L18-201ENST00000553347 1267 ntBASIC22.42■■□□□ 1.18
CCDC189A1A4V9 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
CCDC189A1A4V9 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.42■■□□□ 1.18
CCDC189A1A4V9 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.42■■□□□ 1.18
CCDC189A1A4V9 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
CCDC189A1A4V9 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.42■■□□□ 1.18
CCDC189A1A4V9 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC189A1A4V9 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.42■■□□□ 1.18
CCDC189A1A4V9 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC22.42■■□□□ 1.18
CCDC189A1A4V9 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC189A1A4V9 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22.42■■□□□ 1.18
CCDC189A1A4V9 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC189A1A4V9 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC189A1A4V9 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC22.41■■□□□ 1.18
CCDC189A1A4V9 AC092068.2-201ENST00000590491 1708 ntBASIC22.41■■□□□ 1.18
CCDC189A1A4V9 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC189A1A4V9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC22.41■■□□□ 1.18
CCDC189A1A4V9 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC22.41■■□□□ 1.18
CCDC189A1A4V9 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
CCDC189A1A4V9 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC189A1A4V9 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC189A1A4V9 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms