Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRDV1A0A1B0GX56 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
TRDV1A0A1B0GX56 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRDV1A0A1B0GX56 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRDV1A0A1B0GX56 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRDV1A0A1B0GX56 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.9■□□□□ 0.78
TRDV1A0A1B0GX56 MIR3648-2-201ENST00000581792 180 ntBASIC19.9■□□□□ 0.78
TRDV1A0A1B0GX56 MIR3648-1-201ENST00000615959 180 ntBASIC19.9■□□□□ 0.78
TRDV1A0A1B0GX56 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.9■□□□□ 0.78
TRDV1A0A1B0GX56 AL137060.1-201ENST00000618151 2648 ntBASIC19.9■□□□□ 0.78
TRDV1A0A1B0GX56 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRDV1A0A1B0GX56 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRDV1A0A1B0GX56 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.9■□□□□ 0.78
TRDV1A0A1B0GX56 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TRDV1A0A1B0GX56 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRDV1A0A1B0GX56 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.9■□□□□ 0.78
TRDV1A0A1B0GX56 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRDV1A0A1B0GX56 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRDV1A0A1B0GX56 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRDV1A0A1B0GX56 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
TRDV1A0A1B0GX56 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.89■□□□□ 0.77
TRDV1A0A1B0GX56 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRDV1A0A1B0GX56 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.88■□□□□ 0.77
TRDV1A0A1B0GX56 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.88■□□□□ 0.77
TRDV1A0A1B0GX56 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRDV1A0A1B0GX56 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRDV1A0A1B0GX56 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
TRDV1A0A1B0GX56 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRDV1A0A1B0GX56 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRDV1A0A1B0GX56 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.88■□□□□ 0.77
TRDV1A0A1B0GX56 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRDV1A0A1B0GX56 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.88■□□□□ 0.77
TRDV1A0A1B0GX56 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRDV1A0A1B0GX56 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRDV1A0A1B0GX56 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TRDV1A0A1B0GX56 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRDV1A0A1B0GX56 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
TRDV1A0A1B0GX56 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.87■□□□□ 0.77
TRDV1A0A1B0GX56 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRDV1A0A1B0GX56 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRDV1A0A1B0GX56 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRDV1A0A1B0GX56 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.87■□□□□ 0.77
TRDV1A0A1B0GX56 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.87■□□□□ 0.77
TRDV1A0A1B0GX56 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRDV1A0A1B0GX56 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRDV1A0A1B0GX56 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRDV1A0A1B0GX56 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TRDV1A0A1B0GX56 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.86■□□□□ 0.77
TRDV1A0A1B0GX56 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRDV1A0A1B0GX56 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRDV1A0A1B0GX56 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TRDV1A0A1B0GX56 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRDV1A0A1B0GX56 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.86■□□□□ 0.77
TRDV1A0A1B0GX56 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TRDV1A0A1B0GX56 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.86■□□□□ 0.77
TRDV1A0A1B0GX56 RAP2CP1-202ENST00000605179 643 ntBASIC19.86■□□□□ 0.77
TRDV1A0A1B0GX56 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRDV1A0A1B0GX56 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRDV1A0A1B0GX56 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRDV1A0A1B0GX56 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRDV1A0A1B0GX56 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.86■□□□□ 0.77
TRDV1A0A1B0GX56 C11orf96-202ENST00000528572 1834 ntBASIC19.86■□□□□ 0.77
TRDV1A0A1B0GX56 AC092053.2-201ENST00000640557 1818 ntBASIC19.86■□□□□ 0.77
TRDV1A0A1B0GX56 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
TRDV1A0A1B0GX56 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TRDV1A0A1B0GX56 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRDV1A0A1B0GX56 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRDV1A0A1B0GX56 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRDV1A0A1B0GX56 AL022069.1-201ENST00000568025 1636 ntBASIC19.85■□□□□ 0.77
TRDV1A0A1B0GX56 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRDV1A0A1B0GX56 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRDV1A0A1B0GX56 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.85■□□□□ 0.77
TRDV1A0A1B0GX56 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRDV1A0A1B0GX56 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRDV1A0A1B0GX56 AC139530.1-201ENST00000575312 1977 ntBASIC19.84■□□□□ 0.77
TRDV1A0A1B0GX56 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRDV1A0A1B0GX56 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRDV1A0A1B0GX56 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRDV1A0A1B0GX56 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRDV1A0A1B0GX56 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TRDV1A0A1B0GX56 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRDV1A0A1B0GX56 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.84■□□□□ 0.77
TRDV1A0A1B0GX56 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRDV1A0A1B0GX56 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.84■□□□□ 0.77
TRDV1A0A1B0GX56 AC026202.3-201ENST00000600805 1127 ntBASIC19.84■□□□□ 0.77
TRDV1A0A1B0GX56 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRDV1A0A1B0GX56 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.84■□□□□ 0.77
TRDV1A0A1B0GX56 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
TRDV1A0A1B0GX56 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRDV1A0A1B0GX56 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.84■□□□□ 0.77
TRDV1A0A1B0GX56 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.84■□□□□ 0.77
TRDV1A0A1B0GX56 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRDV1A0A1B0GX56 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.83■□□□□ 0.77
TRDV1A0A1B0GX56 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRDV1A0A1B0GX56 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRDV1A0A1B0GX56 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
TRDV1A0A1B0GX56 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
TRDV1A0A1B0GX56 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRDV1A0A1B0GX56 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
TRDV1A0A1B0GX56 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms