Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF103-CHMP3A0A140T963 AC011551.1-201ENST00000614101 683 ntBASIC21.62■■□□□ 1.05
RNF103-CHMP3A0A140T963 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF103-CHMP3A0A140T963 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.62■■□□□ 1.05
RNF103-CHMP3A0A140T963 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
RNF103-CHMP3A0A140T963 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF103-CHMP3A0A140T963 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF103-CHMP3A0A140T963 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF103-CHMP3A0A140T963 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF103-CHMP3A0A140T963 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF103-CHMP3A0A140T963 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF103-CHMP3A0A140T963 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF103-CHMP3A0A140T963 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF103-CHMP3A0A140T963 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF103-CHMP3A0A140T963 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF103-CHMP3A0A140T963 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF103-CHMP3A0A140T963 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF103-CHMP3A0A140T963 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RNF103-CHMP3A0A140T963 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.61■■□□□ 1.05
RNF103-CHMP3A0A140T963 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.61■■□□□ 1.05
RNF103-CHMP3A0A140T963 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF103-CHMP3A0A140T963 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF103-CHMP3A0A140T963 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF103-CHMP3A0A140T963 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
RNF103-CHMP3A0A140T963 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
RNF103-CHMP3A0A140T963 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
RNF103-CHMP3A0A140T963 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF103-CHMP3A0A140T963 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF103-CHMP3A0A140T963 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.6■■□□□ 1.05
RNF103-CHMP3A0A140T963 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF103-CHMP3A0A140T963 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF103-CHMP3A0A140T963 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.6■■□□□ 1.05
RNF103-CHMP3A0A140T963 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF103-CHMP3A0A140T963 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
RNF103-CHMP3A0A140T963 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF103-CHMP3A0A140T963 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.59■■□□□ 1.05
RNF103-CHMP3A0A140T963 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.59■■□□□ 1.05
RNF103-CHMP3A0A140T963 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.59■■□□□ 1.05
RNF103-CHMP3A0A140T963 AC019171.1-201ENST00000601251 1056 ntBASIC21.59■■□□□ 1.05
RNF103-CHMP3A0A140T963 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF103-CHMP3A0A140T963 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF103-CHMP3A0A140T963 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF103-CHMP3A0A140T963 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF103-CHMP3A0A140T963 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
RNF103-CHMP3A0A140T963 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF103-CHMP3A0A140T963 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF103-CHMP3A0A140T963 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
RNF103-CHMP3A0A140T963 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RNF103-CHMP3A0A140T963 AL161729.1-201ENST00000604104 1402 ntBASIC21.58■■□□□ 1.05
RNF103-CHMP3A0A140T963 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF103-CHMP3A0A140T963 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
RNF103-CHMP3A0A140T963 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF103-CHMP3A0A140T963 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
RNF103-CHMP3A0A140T963 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
RNF103-CHMP3A0A140T963 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RNF103-CHMP3A0A140T963 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RNF103-CHMP3A0A140T963 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF103-CHMP3A0A140T963 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RNF103-CHMP3A0A140T963 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF103-CHMP3A0A140T963 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF103-CHMP3A0A140T963 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
RNF103-CHMP3A0A140T963 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF103-CHMP3A0A140T963 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF103-CHMP3A0A140T963 AC004987.1-201ENST00000428627 508 ntBASIC21.57■■□□□ 1.04
RNF103-CHMP3A0A140T963 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF103-CHMP3A0A140T963 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.57■■□□□ 1.04
RNF103-CHMP3A0A140T963 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.57■■□□□ 1.04
RNF103-CHMP3A0A140T963 AC022616.5-201ENST00000518796 181 ntBASIC21.57■■□□□ 1.04
RNF103-CHMP3A0A140T963 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.57■■□□□ 1.04
RNF103-CHMP3A0A140T963 BHLHE23-202ENST00000612929 1109 ntBASIC21.57■■□□□ 1.04
RNF103-CHMP3A0A140T963 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
RNF103-CHMP3A0A140T963 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.56■■□□□ 1.04
RNF103-CHMP3A0A140T963 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF103-CHMP3A0A140T963 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.56■■□□□ 1.04
RNF103-CHMP3A0A140T963 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF103-CHMP3A0A140T963 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF103-CHMP3A0A140T963 ATP5G2P3-201ENST00000429083 425 ntBASIC21.56■■□□□ 1.04
RNF103-CHMP3A0A140T963 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF103-CHMP3A0A140T963 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF103-CHMP3A0A140T963 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
RNF103-CHMP3A0A140T963 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
RNF103-CHMP3A0A140T963 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF103-CHMP3A0A140T963 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF103-CHMP3A0A140T963 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF103-CHMP3A0A140T963 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.55■■□□□ 1.04
RNF103-CHMP3A0A140T963 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RNF103-CHMP3A0A140T963 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
RNF103-CHMP3A0A140T963 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.55■■□□□ 1.04
RNF103-CHMP3A0A140T963 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RNF103-CHMP3A0A140T963 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF103-CHMP3A0A140T963 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF103-CHMP3A0A140T963 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF103-CHMP3A0A140T963 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
RNF103-CHMP3A0A140T963 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF103-CHMP3A0A140T963 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RNF103-CHMP3A0A140T963 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RNF103-CHMP3A0A140T963 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF103-CHMP3A0A140T963 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF103-CHMP3A0A140T963 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF103-CHMP3A0A140T963 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms