Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
TRAV5A0A0B4J249 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
TRAV5A0A0B4J249 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV5A0A0B4J249 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV5A0A0B4J249 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV5A0A0B4J249 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV5A0A0B4J249 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV5A0A0B4J249 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV5A0A0B4J249 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TRAV5A0A0B4J249 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TRAV5A0A0B4J249 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV5A0A0B4J249 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV5A0A0B4J249 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV5A0A0B4J249 AC087393.1-201ENST00000582896 145 ntBASIC17.51■□□□□ 0.39
TRAV5A0A0B4J249 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAV5A0A0B4J249 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAV5A0A0B4J249 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TRAV5A0A0B4J249 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV5A0A0B4J249 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV5A0A0B4J249 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV5A0A0B4J249 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
TRAV5A0A0B4J249 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV5A0A0B4J249 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV5A0A0B4J249 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV5A0A0B4J249 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.5■□□□□ 0.39
TRAV5A0A0B4J249 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV5A0A0B4J249 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC17.5■□□□□ 0.39
TRAV5A0A0B4J249 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TRAV5A0A0B4J249 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV5A0A0B4J249 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.5■□□□□ 0.39
TRAV5A0A0B4J249 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV5A0A0B4J249 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV5A0A0B4J249 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV5A0A0B4J249 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV5A0A0B4J249 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
TRAV5A0A0B4J249 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV5A0A0B4J249 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV5A0A0B4J249 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV5A0A0B4J249 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV5A0A0B4J249 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TRAV5A0A0B4J249 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV5A0A0B4J249 EI24-204ENST00000527235 1625 ntTSL 5 BASIC17.49■□□□□ 0.39
TRAV5A0A0B4J249 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV5A0A0B4J249 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV5A0A0B4J249 ECEL1P1-201ENST00000373592 1742 ntBASIC17.49■□□□□ 0.39
TRAV5A0A0B4J249 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV5A0A0B4J249 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV5A0A0B4J249 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TRAV5A0A0B4J249 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV5A0A0B4J249 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV5A0A0B4J249 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TRAV5A0A0B4J249 MIR4449-201ENST00000578365 66 ntBASIC17.48■□□□□ 0.39
TRAV5A0A0B4J249 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV5A0A0B4J249 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC17.48■□□□□ 0.39
TRAV5A0A0B4J249 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV5A0A0B4J249 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV5A0A0B4J249 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV5A0A0B4J249 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV5A0A0B4J249 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
TRAV5A0A0B4J249 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRAV5A0A0B4J249 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV5A0A0B4J249 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV5A0A0B4J249 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC17.47■□□□□ 0.39
TRAV5A0A0B4J249 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV5A0A0B4J249 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV5A0A0B4J249 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV5A0A0B4J249 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV5A0A0B4J249 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV5A0A0B4J249 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV5A0A0B4J249 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV5A0A0B4J249 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV5A0A0B4J249 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
TRAV5A0A0B4J249 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV5A0A0B4J249 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV5A0A0B4J249 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TRAV5A0A0B4J249 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV5A0A0B4J249 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.46■□□□□ 0.39
TRAV5A0A0B4J249 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
TRAV5A0A0B4J249 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV5A0A0B4J249 ALDH1A3-203ENST00000557963 1670 ntBASIC17.46■□□□□ 0.39
TRAV5A0A0B4J249 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV5A0A0B4J249 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV5A0A0B4J249 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC17.46■□□□□ 0.39
TRAV5A0A0B4J249 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TRAV5A0A0B4J249 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC17.46■□□□□ 0.39
TRAV5A0A0B4J249 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.46■□□□□ 0.39
TRAV5A0A0B4J249 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV5A0A0B4J249 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV5A0A0B4J249 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV5A0A0B4J249 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV5A0A0B4J249 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.46■□□□□ 0.39
TRAV5A0A0B4J249 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.46■□□□□ 0.39
TRAV5A0A0B4J249 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
TRAV5A0A0B4J249 AC131274.2-201ENST00000580697 1507 ntBASIC17.46■□□□□ 0.39
TRAV5A0A0B4J249 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TRAV5A0A0B4J249 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
TRAV5A0A0B4J249 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV5A0A0B4J249 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV5A0A0B4J249 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TRAV5A0A0B4J249 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms