Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 TSPY9P-201ENST00000440215 945 ntBASIC17.01■□□□□ 0.31
TRAV2A0A0B4J234 TSPY11P-201ENST00000442607 1045 ntBASIC17.01■□□□□ 0.31
TRAV2A0A0B4J234 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAV2A0A0B4J234 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV2A0A0B4J234 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAV2A0A0B4J234 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRAV2A0A0B4J234 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV2A0A0B4J234 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV2A0A0B4J234 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.01■□□□□ 0.31
TRAV2A0A0B4J234 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV2A0A0B4J234 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TRAV2A0A0B4J234 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.01■□□□□ 0.31
TRAV2A0A0B4J234 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAV2A0A0B4J234 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV2A0A0B4J234 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV2A0A0B4J234 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAV2A0A0B4J234 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV2A0A0B4J234 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV2A0A0B4J234 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV2A0A0B4J234 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV2A0A0B4J234 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV2A0A0B4J234 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV2A0A0B4J234 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TRAV2A0A0B4J234 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV2A0A0B4J234 MIR6724-1-201ENST00000616420 92 ntBASIC17■□□□□ 0.31
TRAV2A0A0B4J234 MIR6724-2-201ENST00000616483 92 ntBASIC17■□□□□ 0.31
TRAV2A0A0B4J234 MIR6724-4-201ENST00000617390 92 ntBASIC17■□□□□ 0.31
TRAV2A0A0B4J234 MIR6724-3-201ENST00000622482 92 ntBASIC17■□□□□ 0.31
TRAV2A0A0B4J234 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV2A0A0B4J234 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV2A0A0B4J234 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV2A0A0B4J234 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TRAV2A0A0B4J234 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV2A0A0B4J234 THRA-202ENST00000394121 2260 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAV2A0A0B4J234 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV2A0A0B4J234 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV2A0A0B4J234 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV2A0A0B4J234 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV2A0A0B4J234 CD72-202ENST00000378430 585 ntTSL 3 BASIC16.99■□□□□ 0.31
TRAV2A0A0B4J234 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TRAV2A0A0B4J234 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC16.99■□□□□ 0.31
TRAV2A0A0B4J234 UNC93B8-201ENST00000511903 705 ntBASIC16.99■□□□□ 0.31
TRAV2A0A0B4J234 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV2A0A0B4J234 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TRAV2A0A0B4J234 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TRAV2A0A0B4J234 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV2A0A0B4J234 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAV2A0A0B4J234 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV2A0A0B4J234 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV2A0A0B4J234 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV2A0A0B4J234 RARA-203ENST00000394086 2008 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAV2A0A0B4J234 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAV2A0A0B4J234 KRT16P3-201ENST00000439127 1283 ntBASIC16.98■□□□□ 0.31
TRAV2A0A0B4J234 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC16.98■□□□□ 0.31
TRAV2A0A0B4J234 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV2A0A0B4J234 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAV2A0A0B4J234 ABCB10P4-201ENST00000566803 2184 ntBASIC16.98■□□□□ 0.31
TRAV2A0A0B4J234 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV2A0A0B4J234 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV2A0A0B4J234 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV2A0A0B4J234 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV2A0A0B4J234 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV2A0A0B4J234 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV2A0A0B4J234 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV2A0A0B4J234 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV2A0A0B4J234 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV2A0A0B4J234 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC16.97■□□□□ 0.31
TRAV2A0A0B4J234 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV2A0A0B4J234 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV2A0A0B4J234 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TRAV2A0A0B4J234 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV2A0A0B4J234 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV2A0A0B4J234 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAV2A0A0B4J234 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAV2A0A0B4J234 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TRAV2A0A0B4J234 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV2A0A0B4J234 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV2A0A0B4J234 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAV2A0A0B4J234 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV2A0A0B4J234 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TRAV2A0A0B4J234 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV2A0A0B4J234 LSM4-201ENST00000252816 986 ntTSL 2 BASIC16.96■□□□□ 0.31
TRAV2A0A0B4J234 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC16.96■□□□□ 0.31
TRAV2A0A0B4J234 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV2A0A0B4J234 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TRAV2A0A0B4J234 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAV2A0A0B4J234 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC16.96■□□□□ 0.3
TRAV2A0A0B4J234 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV2A0A0B4J234 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV2A0A0B4J234 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV2A0A0B4J234 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV2A0A0B4J234 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC16.95■□□□□ 0.3
TRAV2A0A0B4J234 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV2A0A0B4J234 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV2A0A0B4J234 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC16.95■□□□□ 0.3
TRAV2A0A0B4J234 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV2A0A0B4J234 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV2A0A0B4J234 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV2A0A0B4J234 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV2A0A0B4J234 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms