Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.02■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.02■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.02■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.02■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.02■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.02■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.02■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.02■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.02■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 AC239859.2-201ENST00000444165 318 ntBASIC20.01■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.01■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.01■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.01■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 DUSP8P3-201ENST00000399571 1760 ntBASIC20■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 Z92544.1-202ENST00000571933 1220 ntBASIC20■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 MIR4787-201ENST00000607364 84 ntBASIC19.99■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 AC092028.1-203ENST00000608262 953 ntBASIC19.99■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.99■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 AC079630.1-202ENST00000618127 1840 ntBASIC19.99■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.98■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 KRT125P-201ENST00000546827 989 ntBASIC19.98■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.98■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.98■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.98■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.97■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.97■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.97■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 MIR6722-201ENST00000617286 78 ntBASIC19.97■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.97■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.96■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.96■□□□□ 0.79
IGKV1D-43A0A0B4J1Z2 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
IGKV1D-43A0A0B4J1Z2 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
IGKV1D-43A0A0B4J1Z2 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.95■□□□□ 0.78
IGKV1D-43A0A0B4J1Z2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
IGKV1D-43A0A0B4J1Z2 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
IGKV1D-43A0A0B4J1Z2 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
IGKV1D-43A0A0B4J1Z2 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.95■□□□□ 0.78
IGKV1D-43A0A0B4J1Z2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
IGKV1D-43A0A0B4J1Z2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
IGKV1D-43A0A0B4J1Z2 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
IGKV1D-43A0A0B4J1Z2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
IGKV1D-43A0A0B4J1Z2 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
IGKV1D-43A0A0B4J1Z2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
IGKV1D-43A0A0B4J1Z2 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms