Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.7■□□□□ 0.58
IGHV3-43A0A0B4J1X8 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
IGHV3-43A0A0B4J1X8 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
IGHV3-43A0A0B4J1X8 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
IGHV3-43A0A0B4J1X8 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IGHV3-43A0A0B4J1X8 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IGHV3-43A0A0B4J1X8 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IGHV3-43A0A0B4J1X8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.7■□□□□ 0.58
IGHV3-43A0A0B4J1X8 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
IGHV3-43A0A0B4J1X8 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IGHV3-43A0A0B4J1X8 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
IGHV3-43A0A0B4J1X8 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.69■□□□□ 0.58
IGHV3-43A0A0B4J1X8 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
IGHV3-43A0A0B4J1X8 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IGHV3-43A0A0B4J1X8 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.69■□□□□ 0.58
IGHV3-43A0A0B4J1X8 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IGHV3-43A0A0B4J1X8 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.69■□□□□ 0.58
IGHV3-43A0A0B4J1X8 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.69■□□□□ 0.58
IGHV3-43A0A0B4J1X8 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
IGHV3-43A0A0B4J1X8 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IGHV3-43A0A0B4J1X8 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IGHV3-43A0A0B4J1X8 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
IGHV3-43A0A0B4J1X8 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.68■□□□□ 0.58
IGHV3-43A0A0B4J1X8 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
IGHV3-43A0A0B4J1X8 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IGHV3-43A0A0B4J1X8 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.68■□□□□ 0.58
IGHV3-43A0A0B4J1X8 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IGHV3-43A0A0B4J1X8 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
IGHV3-43A0A0B4J1X8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
IGHV3-43A0A0B4J1X8 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
IGHV3-43A0A0B4J1X8 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IGHV3-43A0A0B4J1X8 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.68■□□□□ 0.58
IGHV3-43A0A0B4J1X8 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
IGHV3-43A0A0B4J1X8 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IGHV3-43A0A0B4J1X8 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
IGHV3-43A0A0B4J1X8 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IGHV3-43A0A0B4J1X8 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IGHV3-43A0A0B4J1X8 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IGHV3-43A0A0B4J1X8 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
IGHV3-43A0A0B4J1X8 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
IGHV3-43A0A0B4J1X8 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.67■□□□□ 0.58
IGHV3-43A0A0B4J1X8 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.67■□□□□ 0.58
IGHV3-43A0A0B4J1X8 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.67■□□□□ 0.58
IGHV3-43A0A0B4J1X8 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IGHV3-43A0A0B4J1X8 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IGHV3-43A0A0B4J1X8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.66■□□□□ 0.58
IGHV3-43A0A0B4J1X8 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IGHV3-43A0A0B4J1X8 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IGHV3-43A0A0B4J1X8 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
IGHV3-43A0A0B4J1X8 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
IGHV3-43A0A0B4J1X8 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IGHV3-43A0A0B4J1X8 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.66■□□□□ 0.58
IGHV3-43A0A0B4J1X8 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.66■□□□□ 0.58
IGHV3-43A0A0B4J1X8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.66■□□□□ 0.58
IGHV3-43A0A0B4J1X8 AC137630.3-201ENST00000607245 391 ntBASIC18.66■□□□□ 0.58
IGHV3-43A0A0B4J1X8 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.66■□□□□ 0.58
IGHV3-43A0A0B4J1X8 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IGHV3-43A0A0B4J1X8 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IGHV3-43A0A0B4J1X8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IGHV3-43A0A0B4J1X8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.65■□□□□ 0.58
IGHV3-43A0A0B4J1X8 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.65■□□□□ 0.58
IGHV3-43A0A0B4J1X8 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
IGHV3-43A0A0B4J1X8 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
IGHV3-43A0A0B4J1X8 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
IGHV3-43A0A0B4J1X8 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
IGHV3-43A0A0B4J1X8 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
IGHV3-43A0A0B4J1X8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
IGHV3-43A0A0B4J1X8 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.65■□□□□ 0.58
IGHV3-43A0A0B4J1X8 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.65■□□□□ 0.58
IGHV3-43A0A0B4J1X8 RARRES2P1-201ENST00000474487 481 ntBASIC18.65■□□□□ 0.58
IGHV3-43A0A0B4J1X8 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.65■□□□□ 0.58
IGHV3-43A0A0B4J1X8 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IGHV3-43A0A0B4J1X8 SNX5-217ENST00000606557 1087 ntBASIC18.65■□□□□ 0.58
IGHV3-43A0A0B4J1X8 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.65■□□□□ 0.58
IGHV3-43A0A0B4J1X8 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IGHV3-43A0A0B4J1X8 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
IGHV3-43A0A0B4J1X8 AC092068.2-201ENST00000590491 1708 ntBASIC18.65■□□□□ 0.58
IGHV3-43A0A0B4J1X8 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
IGHV3-43A0A0B4J1X8 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
IGHV3-43A0A0B4J1X8 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
IGHV3-43A0A0B4J1X8 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
IGHV3-43A0A0B4J1X8 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
IGHV3-43A0A0B4J1X8 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
IGHV3-43A0A0B4J1X8 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IGHV3-43A0A0B4J1X8 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.64■□□□□ 0.57
IGHV3-43A0A0B4J1X8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.64■□□□□ 0.57
IGHV3-43A0A0B4J1X8 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.64■□□□□ 0.57
IGHV3-43A0A0B4J1X8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.64■□□□□ 0.57
IGHV3-43A0A0B4J1X8 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IGHV3-43A0A0B4J1X8 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
IGHV3-43A0A0B4J1X8 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
IGHV3-43A0A0B4J1X8 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IGHV3-43A0A0B4J1X8 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IGHV3-43A0A0B4J1X8 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
IGHV3-43A0A0B4J1X8 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.64■□□□□ 0.57
IGHV3-43A0A0B4J1X8 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.63■□□□□ 0.57
IGHV3-43A0A0B4J1X8 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
IGHV3-43A0A0B4J1X8 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IGHV3-43A0A0B4J1X8 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IGHV3-43A0A0B4J1X8 BX664725.1-201ENST00000438252 379 ntBASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms