Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 AC011840.2-201ENST00000563063 1520 ntBASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 MIR1202-201ENST00000408529 83 ntBASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 AC004945.1-201ENST00000416738 983 ntBASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 KRT223P-202ENST00000449164 1292 ntBASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 IGHV3-71-201ENST00000523324 359 ntBASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 DUX4L45-201ENST00000566406 1057 ntBASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 AL359881.2-201ENST00000602973 570 ntBASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 AC244157.2-201ENST00000616239 1006 ntBASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 AP001972.5-201ENST00000624624 2338 ntBASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 AC009093.10-201ENST00000641956 1442 ntBASIC9.48□□□□□ -0.89
LINC00474Q9P2X8 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC9.47□□□□□ -0.89
LINC00474Q9P2X8 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
LINC00474Q9P2X8 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
LINC00474Q9P2X8 L1CAM-202ENST00000361981 5004 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
LINC00474Q9P2X8 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC9.47□□□□□ -0.89
LINC00474Q9P2X8 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC9.47□□□□□ -0.89
LINC00474Q9P2X8 NUTM2HP-201ENST00000442076 2498 ntBASIC9.47□□□□□ -0.89
LINC00474Q9P2X8 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
LINC00474Q9P2X8 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
LINC00474Q9P2X8 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
LINC00474Q9P2X8 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
LINC00474Q9P2X8 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
LINC00474Q9P2X8 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
LINC00474Q9P2X8 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
LINC00474Q9P2X8 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
LINC00474Q9P2X8 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
LINC00474Q9P2X8 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
LINC00474Q9P2X8 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
LINC00474Q9P2X8 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
LINC00474Q9P2X8 GK-202ENST00000378941 458 ntTSL 3 BASIC9.47□□□□□ -0.89
LINC00474Q9P2X8 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC9.47□□□□□ -0.89
LINC00474Q9P2X8 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
LINC00474Q9P2X8 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
LINC00474Q9P2X8 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
LINC00474Q9P2X8 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC9.47□□□□□ -0.89
LINC00474Q9P2X8 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC9.47□□□□□ -0.89
LINC00474Q9P2X8 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC9.47□□□□□ -0.89
LINC00474Q9P2X8 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC9.47□□□□□ -0.89
LINC00474Q9P2X8 U91328.1-201ENST00000437528 223 ntBASIC9.47□□□□□ -0.89
LINC00474Q9P2X8 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC9.47□□□□□ -0.89
LINC00474Q9P2X8 ATP5G2P4-201ENST00000442175 420 ntBASIC9.47□□□□□ -0.89
LINC00474Q9P2X8 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
LINC00474Q9P2X8 AL590640.2-201ENST00000457038 527 ntBASIC9.47□□□□□ -0.89
LINC00474Q9P2X8 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC9.47□□□□□ -0.89
LINC00474Q9P2X8 AL391280.1-201ENST00000506969 1062 ntBASIC9.47□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms