Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRFN1Q9P244 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRFN1Q9P244 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
LRFN1Q9P244 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.2□□□□□ -0.3
LRFN1Q9P244 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
LRFN1Q9P244 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRFN1Q9P244 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRFN1Q9P244 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRFN1Q9P244 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.2□□□□□ -0.3
LRFN1Q9P244 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRFN1Q9P244 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRFN1Q9P244 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRFN1Q9P244 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRFN1Q9P244 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LRFN1Q9P244 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
LRFN1Q9P244 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
LRFN1Q9P244 AC015656.1-201ENST00000624209 3578 ntBASIC13.19□□□□□ -0.3
LRFN1Q9P244 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRFN1Q9P244 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRFN1Q9P244 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LRFN1Q9P244 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.19□□□□□ -0.3
LRFN1Q9P244 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
LRFN1Q9P244 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.19□□□□□ -0.3
LRFN1Q9P244 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
LRFN1Q9P244 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRFN1Q9P244 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRFN1Q9P244 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRFN1Q9P244 KRT17P5-201ENST00000332088 839 ntBASIC13.19□□□□□ -0.3
LRFN1Q9P244 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC13.19□□□□□ -0.3
LRFN1Q9P244 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRFN1Q9P244 AL807761.2-201ENST00000422849 729 ntBASIC13.19□□□□□ -0.3
LRFN1Q9P244 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LRFN1Q9P244 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
LRFN1Q9P244 KRT8P1-201ENST00000557533 1207 ntBASIC13.19□□□□□ -0.3
LRFN1Q9P244 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC13.19□□□□□ -0.3
LRFN1Q9P244 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC13.19□□□□□ -0.3
LRFN1Q9P244 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.19□□□□□ -0.3
LRFN1Q9P244 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRFN1Q9P244 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
LRFN1Q9P244 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LRFN1Q9P244 KRT8P31-201ENST00000504812 1408 ntBASIC13.19□□□□□ -0.3
LRFN1Q9P244 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
LRFN1Q9P244 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
LRFN1Q9P244 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRFN1Q9P244 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.19□□□□□ -0.3
LRFN1Q9P244 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LRFN1Q9P244 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRFN1Q9P244 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LRFN1Q9P244 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LRFN1Q9P244 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
LRFN1Q9P244 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
LRFN1Q9P244 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.19□□□□□ -0.3
LRFN1Q9P244 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRFN1Q9P244 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.18□□□□□ -0.3
LRFN1Q9P244 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LRFN1Q9P244 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.18□□□□□ -0.3
LRFN1Q9P244 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRFN1Q9P244 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.18□□□□□ -0.3
LRFN1Q9P244 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
LRFN1Q9P244 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LRFN1Q9P244 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
LRFN1Q9P244 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
LRFN1Q9P244 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRFN1Q9P244 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRFN1Q9P244 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRFN1Q9P244 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
LRFN1Q9P244 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
LRFN1Q9P244 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.18□□□□□ -0.3
LRFN1Q9P244 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.18□□□□□ -0.3
LRFN1Q9P244 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRFN1Q9P244 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRFN1Q9P244 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
LRFN1Q9P244 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
LRFN1Q9P244 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRFN1Q9P244 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRFN1Q9P244 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRFN1Q9P244 AP000356.3-201ENST00000382243 753 ntBASIC13.18□□□□□ -0.3
LRFN1Q9P244 MIR557-201ENST00000385239 98 ntBASIC13.18□□□□□ -0.3
LRFN1Q9P244 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LRFN1Q9P244 RPS9P1-201ENST00000419943 583 ntBASIC13.18□□□□□ -0.3
LRFN1Q9P244 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.18□□□□□ -0.3
LRFN1Q9P244 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LRFN1Q9P244 AC069218.1-201ENST00000435269 762 ntBASIC13.18□□□□□ -0.3
LRFN1Q9P244 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC13.18□□□□□ -0.3
LRFN1Q9P244 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC13.18□□□□□ -0.3
LRFN1Q9P244 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC13.18□□□□□ -0.3
LRFN1Q9P244 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
LRFN1Q9P244 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC13.18□□□□□ -0.3
LRFN1Q9P244 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC13.18□□□□□ -0.3
LRFN1Q9P244 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
LRFN1Q9P244 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC13.18□□□□□ -0.3
LRFN1Q9P244 MIR4722-201ENST00000578292 60 ntBASIC13.18□□□□□ -0.3
LRFN1Q9P244 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC13.18□□□□□ -0.3
LRFN1Q9P244 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC13.18□□□□□ -0.3
LRFN1Q9P244 SIGLEC18P-201ENST00000602271 909 ntBASIC13.18□□□□□ -0.3
LRFN1Q9P244 SPCS2P2-201ENST00000603270 608 ntBASIC13.18□□□□□ -0.3
LRFN1Q9P244 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC13.18□□□□□ -0.3
LRFN1Q9P244 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRFN1Q9P244 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRFN1Q9P244 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms