Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC15.32■□□□□ 0.04
CNTN3Q9P232 RN7SL181P-201ENST00000462921 277 ntBASIC15.32■□□□□ 0.04
CNTN3Q9P232 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC15.32■□□□□ 0.04
CNTN3Q9P232 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC15.32■□□□□ 0.04
CNTN3Q9P232 RN7SL455P-201ENST00000580629 282 ntBASIC15.32■□□□□ 0.04
CNTN3Q9P232 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC15.32■□□□□ 0.04
CNTN3Q9P232 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC15.32■□□□□ 0.04
CNTN3Q9P232 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC15.32■□□□□ 0.04
CNTN3Q9P232 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC15.32■□□□□ 0.04
CNTN3Q9P232 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC15.32■□□□□ 0.04
CNTN3Q9P232 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC15.32■□□□□ 0.04
CNTN3Q9P232 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC15.32■□□□□ 0.04
CNTN3Q9P232 AP001184.1-201ENST00000637936 376 ntBASIC15.32■□□□□ 0.04
CNTN3Q9P232 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNTN3Q9P232 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.32■□□□□ 0.04
CNTN3Q9P232 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNTN3Q9P232 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.32■□□□□ 0.04
CNTN3Q9P232 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNTN3Q9P232 AL590824.1-201ENST00000403828 1349 ntBASIC15.32■□□□□ 0.04
CNTN3Q9P232 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.32■□□□□ 0.04
CNTN3Q9P232 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.32■□□□□ 0.04
CNTN3Q9P232 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.32■□□□□ 0.04
CNTN3Q9P232 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CNTN3Q9P232 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNTN3Q9P232 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNTN3Q9P232 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNTN3Q9P232 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNTN3Q9P232 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNTN3Q9P232 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC15.32■□□□□ 0.04
CNTN3Q9P232 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC15.32■□□□□ 0.04
CNTN3Q9P232 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.31■□□□□ 0.04
CNTN3Q9P232 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CNTN3Q9P232 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.31■□□□□ 0.04
CNTN3Q9P232 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNTN3Q9P232 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CNTN3Q9P232 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNTN3Q9P232 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.31■□□□□ 0.04
CNTN3Q9P232 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNTN3Q9P232 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CNTN3Q9P232 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CNTN3Q9P232 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNTN3Q9P232 AC016397.2-201ENST00000624848 1985 ntBASIC15.31■□□□□ 0.04
CNTN3Q9P232 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CNTN3Q9P232 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CNTN3Q9P232 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNTN3Q9P232 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNTN3Q9P232 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNTN3Q9P232 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.31■□□□□ 0.04
CNTN3Q9P232 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNTN3Q9P232 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNTN3Q9P232 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNTN3Q9P232 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNTN3Q9P232 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC15.31■□□□□ 0.04
CNTN3Q9P232 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CNTN3Q9P232 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC15.31■□□□□ 0.04
CNTN3Q9P232 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CNTN3Q9P232 AC078991.1-201ENST00000437297 610 ntBASIC15.31■□□□□ 0.04
CNTN3Q9P232 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC15.31■□□□□ 0.04
CNTN3Q9P232 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC15.31■□□□□ 0.04
CNTN3Q9P232 RPS2P36-201ENST00000456516 831 ntBASIC15.31■□□□□ 0.04
CNTN3Q9P232 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNTN3Q9P232 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CNTN3Q9P232 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC15.31■□□□□ 0.04
CNTN3Q9P232 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC15.31■□□□□ 0.04
CNTN3Q9P232 MIR4722-201ENST00000578292 60 ntBASIC15.31■□□□□ 0.04
CNTN3Q9P232 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC15.31■□□□□ 0.04
CNTN3Q9P232 SIGLEC22P-201ENST00000599104 714 ntBASIC15.31■□□□□ 0.04
CNTN3Q9P232 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC15.31■□□□□ 0.04
CNTN3Q9P232 AC092171.5-201ENST00000608012 942 ntBASIC15.31■□□□□ 0.04
CNTN3Q9P232 AC007881.3-201ENST00000608897 607 ntBASIC15.31■□□□□ 0.04
CNTN3Q9P232 AC084781.1-201ENST00000613737 656 ntBASIC15.31■□□□□ 0.04
CNTN3Q9P232 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
CNTN3Q9P232 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CNTN3Q9P232 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CNTN3Q9P232 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNTN3Q9P232 TEKT4P2-202ENST00000559466 1312 ntBASIC15.31■□□□□ 0.04
CNTN3Q9P232 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC15.31■□□□□ 0.04
CNTN3Q9P232 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNTN3Q9P232 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
CNTN3Q9P232 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.31■□□□□ 0.04
CNTN3Q9P232 TCAM1P-207ENST00000485295 1537 ntBASIC15.31■□□□□ 0.04
CNTN3Q9P232 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC15.31■□□□□ 0.04
CNTN3Q9P232 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNTN3Q9P232 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.31■□□□□ 0.04
CNTN3Q9P232 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNTN3Q9P232 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC15.31■□□□□ 0.04
CNTN3Q9P232 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNTN3Q9P232 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNTN3Q9P232 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNTN3Q9P232 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNTN3Q9P232 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CNTN3Q9P232 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNTN3Q9P232 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CNTN3Q9P232 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CNTN3Q9P232 CICP16-201ENST00000502609 2813 ntBASIC15.3■□□□□ 0.04
CNTN3Q9P232 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNTN3Q9P232 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.3■□□□□ 0.04
CNTN3Q9P232 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CNTN3Q9P232 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNTN3Q9P232 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms